Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1205
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 113 7e-26
07_01_0578 + 4295386-4296489,4297394-4297507 113 9e-26
10_02_0199 + 6668902-6669293,6669825-6669882 35 0.037
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.11
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.15
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.26
05_03_0163 + 9070781-9071320 31 0.46
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 31 0.61
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 30 1.1
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 1.4
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 1.8
01_06_0292 + 28243408-28243543,28243631-28243760,28243860-28244550 29 1.8
10_07_0029 + 12031711-12032464,12044289-12044386 28 4.3
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 28 4.3
05_06_0098 + 25560158-25560925 28 4.3
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 28 4.3
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 28 5.6
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 28 5.6
07_01_0469 - 3552409-3553368 28 5.6
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 28 5.6
06_01_0010 - 151694-151951,152433-152489,152683-152774,153432-15... 28 5.6
04_01_0244 - 3194141-3195091,3195301-3195312 28 5.6
03_01_0147 - 1170481-1171260,1171332-1171511 28 5.6
03_01_0092 - 731069-731434,731569-733080 28 5.6
02_05_0586 - 30158559-30158973,30159911-30159994,30160115-301604... 28 5.6
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 28 5.6
07_03_1636 + 28290642-28291574 27 7.5
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 27 7.5
04_01_0588 + 7657510-7657992,7658397-7658843 27 7.5
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 27 7.5
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 27 7.5
10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540... 27 9.9
10_05_0107 - 9223680-9223980,9224340-9224715,9225722-9225817,922... 27 9.9
09_06_0153 - 21243108-21245660 27 9.9
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 27 9.9
05_06_0065 - 25303143-25303769,25303868-25304758,25305096-253052... 27 9.9
03_05_0466 - 24602715-24603964,24605762-24605944,24606381-246072... 27 9.9
02_02_0147 - 7176478-7176832,7177006-7177334 27 9.9
01_05_0691 + 24330491-24332269 27 9.9
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 113 bits (273), Expect = 7e-26
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWH 115
Score = 58.0 bits (134), Expect = 5e-09
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +3
Query: 75 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 252 HK 257
H+
Sbjct: 63 HQ 64
Score = 35.5 bits (78), Expect = 0.028
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3
Query: 456 VAATGVPALVQARGHIIERFPSFP 527
+AAT VP+LV ARGH IE P FP
Sbjct: 131 LAATAVPSLVLARGHRIEGVPEFP 154
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 113 bits (272), Expect = 9e-26
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWH 116
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +3
Query: 84 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGH+
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Score = 33.9 bits (74), Expect = 0.086
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 456 VAATGVPALVQARGHIIERFPSFPWL*PDKS 548
+AAT VP+LV ARGH IE P P + D +
Sbjct: 132 LAATSVPSLVLARGHRIETVPELPLVISDSA 162
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 35.1 bits (77), Expect = 0.037
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 373
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 369 PPRHMLPKAP*PDLWVPPP 313
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 32.3 bits (70), Expect = 0.26
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>05_03_0163 + 9070781-9071320
Length = 179
Score = 31.5 bits (68), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQG 343
R GGWSQ AE WG G ++ GGG RS +G
Sbjct: 15 RGAGGWSQR-AEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 31.1 bits (67), Expect = 0.61
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 218 EAALLREQGGWSQTSAESWGTGRAV 292
EAALLR G W++ + + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +2
Query: 209 QELEAALLREQGGWSQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 373
+++ A ++GG S S S G++V + + R+R H G G+ G++ + GG+
Sbjct: 64 EKVSGAKSTDEGGGSDKSKGS-EVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122
Query: 374 MFAPTKP-WR 400
M P P WR
Sbjct: 123 MLRPGFPKWR 132
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>01_06_0292 + 28243408-28243543,28243631-28243760,28243860-28244550
Length = 318
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 484 TSAGTPVAATGCCQGRSPLSEVDATVPAPP 395
TS T AA RSPL E+ VP PP
Sbjct: 209 TSVATAAAAAAVAAQRSPLDELICQVPPPP 238
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 374 YVHHDTCYRRHPDRTYG 324
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRYHPRRANG 110
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 171 RPDLVNDVHVSMSKNSRQP--YCVSKEAGHKPVPNHGVPD 284
RP + DV S S +S P SK++GH V HG D
Sbjct: 38 RPSSITDVSRSCSSSSSSPPRSLSSKQSGHADVLAHGAVD 77
>05_06_0098 + 25560158-25560925
Length = 255
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 390 SPGGAGTVASTSDSGERPWQQPVAATGVPALVQARGHIIER 512
SP A AS+S S RP P +++ PAL + ++ R
Sbjct: 16 SPSSAAAAASSSPSSHRPPPPPPSSSSQPALPPSPRTVVPR 56
>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 373
R+ GG S S G+GR R RG R G G GGR
Sbjct: 1176 RQGGGRSGYSGRGGGSGRGGGGYQRDRGSQGSRGGYGGGSRFQDGGR 1222
>10_07_0130 + 13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 218 EAALLREQGG-WSQTSAE-SWGTGRAVARIPRVRGGGTHRSG 337
EAAL E GG W+ + E G RA A PR G SG
Sbjct: 916 EAALSPESGGRWAGPAVELGGGDARAAAAEPRGHGNNLRHSG 957
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 27.9 bits (59), Expect = 5.6
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +2
Query: 125 AGCSQAPPVRIQGAHTSGPGQ*CSRFYVQELEAALLREQGGWSQTSAESWGTGRAVARIP 304
AG + PP R G TSG G S + V+ + +S + + S+G G
Sbjct: 103 AGGGETPPARRGGGRTSGGGG--SSYSVEHSPSP--SPLHPYSDSGSGSYGGGLVANSRA 158
Query: 305 RVRGGGTHRSGQGAFGNMCR 364
+ GGG R + N+ R
Sbjct: 159 KGGGGGAPRGNETVIPNIIR 178
>07_01_0469 - 3552409-3553368
Length = 319
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 374 YVHHDTCYRRHPDRTYG 324
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRFHPRRASG 110
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 350 RRHPDRTYGYHHHGHAEFGQQHVRYPMI 267
R H D +G+HHH H G H P +
Sbjct: 68 RAHGDHHHGHHHHHHGH-GHSHHHGPEV 94
>06_01_0010 -
151694-151951,152433-152489,152683-152774,153432-153531,
153585-154211,154300-154638,154740-154991,155083-155556
Length = 732
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -1
Query: 545 FVGLQPRKARESFNNVSSSLNERWDASSSNG 453
+V ++PR+ ++ V S+ NE WD + ++G
Sbjct: 670 YVVVEPRERGDNEQRVVSAYNEAWDVAGADG 700
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 374 YVHHDTCYRRHPDRTYG 324
Y+ HDT YR HP R G
Sbjct: 98 YIFHDTAYRFHPRRANG 114
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 41 GIASLK*R-NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 202
G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 366 PRHMLPKAP*PDLWVPPPRTRGIRATARPVP 274
P H++P P P L P P+++ R P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297
>02_05_0586 -
30158559-30158973,30159911-30159994,30160115-30160420,
30160534-30160619,30161538-30161858
Length = 403
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 481 SAGTPVAATGCCQGRSPLSEVDATVP 404
SA PVAA GCCQG + + +P
Sbjct: 305 SACNPVAAGGCCQGNGGFTCCQSDLP 330
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 321 PPPRTRGIRATARPVPHDSA-LVCDQPP 241
PPPRTR + PVP SA + QPP
Sbjct: 166 PPPRTRQVNPAPPPVPSPSAPPLPPQPP 193
>07_03_1636 + 28290642-28291574
Length = 310
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 369 PPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPP 241
PP + AP +VPPP +R + P P + L PP
Sbjct: 154 PPPQLFETAPPSPPYVPPPPDAYLRKPSPPSPPPAKLSPPPPP 196
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 156 IRTGGAWLHPAPSHSSLN-TPTLKVGLPIDSF 64
+R+ WL P P+H ++N L + +P+D F
Sbjct: 865 LRSYITWLKPTPAHVAMNPAEALAMQIPVDHF 896
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +2
Query: 221 AALLREQGGWSQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGNMCRGGRMFAPTK 391
+ +L W ++S+ W G R+ + GGG R G P
Sbjct: 214 SGVLPSSSEW-RSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGLGWASSWFGRPNL 272
Query: 392 PWRRW 406
PWRRW
Sbjct: 273 PWRRW 277
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGT--HRSGQGAF 349
R + GW A+ + + R P +GGG R GQG F
Sbjct: 1121 RREQGWDAHQAQVGAQHQNLPRFPPQQGGGNIGERQGQGQF 1161
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 27.5 bits (58), Expect = 7.5
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = +2
Query: 164 AHTSGPGQ*CSRFYVQELEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQG 343
A T+G G YV + + ALL E + E GRA RI RG G GQG
Sbjct: 35 AETAGSGD--DEEYVSDPDDALLPEMRRREASDDEGSEEGRA--RIGSDRGDGDDGDGQG 90
Query: 344 A 346
A
Sbjct: 91 A 91
>10_08_0583 -
18952168-18952263,18953663-18953740,18954006-18954081,
18954687-18954735,18955271-18955469,18955761-18955799,
18955800-18956123
Length = 286
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 321 PPPRTRGIRATARPVPHDSALVCDQPP 241
PPP ++G A P P + V ++PP
Sbjct: 163 PPPTSQGKAAAKEPSPRTNTAVINRPP 189
>10_05_0107 -
9223680-9223980,9224340-9224715,9225722-9225817,
9225870-9225930
Length = 277
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 236 EQGGWSQTSAESWGTGRAVARI-PRVRGGGTH-RSGQ 340
E G W S S TGR AR P + GGG H R GQ
Sbjct: 84 ELGRWCTASVSS-STGRGGARRGPALEGGGGHQRQGQ 119
>09_06_0153 - 21243108-21245660
Length = 850
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 133 APCTVSLFSEYTDTKGRATDRLISLL*RSYTSEIYTNSGDK 11
APCTV +F++ +G A+ RL + + S + N GD+
Sbjct: 612 APCTVGVFADRPFWRGGASFRLPTKISTSEETTAARNQGDQ 652
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 206 VQELEAALLREQGGWSQTSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGRMFA 382
+++L A RE + +A + T +A + R GG HR G+G G GG
Sbjct: 473 IKQLLAGGQRELVATGEAAATAAATAKATPPLARRTADGGAHR-GRGGGGAEADGGARRG 531
Query: 383 PTKPWRR 403
WRR
Sbjct: 532 RGGGWRR 538
>05_06_0065 -
25303143-25303769,25303868-25304758,25305096-25305202,
25305518-25305629
Length = 578
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/71 (26%), Positives = 27/71 (38%)
Frame = +3
Query: 69 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 248
S + PL + S KS + ++ LP V P + +HV K S P C S+
Sbjct: 498 SRDMVPPLPPLPSMKSPSESWLSRALPSVSSNPPATSFLG-IHVQHKKQSPPPRCSSRAP 556
Query: 249 GHKPVPNHGVP 281
H P
Sbjct: 557 AKLVADGHARP 567
>03_05_0466 -
24602715-24603964,24605762-24605944,24606381-24607286,
24609446-24609516,24609737-24609846,24610073-24610108,
24610211-24610278,24610655-24610760,24610850-24610997,
24611091-24611218,24611319-24611454,24611924-24612072
Length = 1096
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -2
Query: 475 GTPVAATGCCQG--RSPLSEVDATVPA 401
G P A TGCCQ S L+ V T P+
Sbjct: 486 GAPCAGTGCCQAPISSDLAYVGGTFPS 512
>02_02_0147 - 7176478-7176832,7177006-7177334
Length = 227
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAV-ARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 403
R+ GGWS +A + G G V +R P + G G G R + P + RR
Sbjct: 88 RQHGGWSTETAAAGGCGNGVHSRRPHLAGVVAIGGVGGQLGAERRSRWQWRPVRRKRR 145
>01_05_0691 + 24330491-24332269
Length = 592
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 438 RPWQQPVAATGVPALVQARGHI 503
RPW VA TGV A++Q+ G +
Sbjct: 234 RPWVPVVAKTGVTAILQSLGGV 255
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,008,081
Number of Sequences: 37544
Number of extensions: 378589
Number of successful extensions: 1581
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -