Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1204
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    26   0.28 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 17/59 (28%), Positives = 24/59 (40%)
 Frame = -2

Query: 399 ACDRNDSCMAMRGDHIAPSEREVPCRPTFVRPSCPGLLQRHDARKTSRSESSTFPCVPI 223
           AC  N +C+   G        E  C P FV P C G +  ++      S + T  CV +
Sbjct: 268 ACHNNGTCLDKVGGF------ECKCPPGFVGPRCEGDI--NECLSNPCSNAGTLDCVQL 318


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 343 RWRDMVAPHRHTGVV 387
           RWRD +    H+GVV
Sbjct: 310 RWRDRIYDAIHSGVV 324


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 259 TKRILYFPLCTDLWECRYHQLLRTFRKRGVSLQAS 155
           T    +F +C D        ++  FRKR V+ + S
Sbjct: 72  THIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDS 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,692
Number of Sequences: 336
Number of extensions: 2160
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)