Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1203
(399 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 101 2e-22
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 100 8e-22
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 97 4e-21
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 97 4e-21
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 95 2e-20
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 95 2e-20
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 74 3e-14
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 74 3e-14
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 54 5e-08
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 53 9e-08
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 53 9e-08
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 52 1e-07
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 52 2e-07
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 52 2e-07
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 52 2e-07
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 52 2e-07
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 49 1e-06
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 49 1e-06
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 49 1e-06
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 49 1e-06
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 48 2e-06
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 48 2e-06
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 43 9e-05
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 43 9e-05
AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical ... 29 1.6
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 28 2.1
Z77133-3|CAB00868.2| 149|Caenorhabditis elegans Hypothetical pr... 26 8.7
AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical... 26 8.7
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 101 bits (242), Expect = 2e-22
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 397
RINVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVF
Sbjct: 46 RINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVF 92
Score = 86.2 bits (204), Expect = 8e-18
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQL
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL 44
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 99.5 bits (237), Expect = 8e-22
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 397
RINVYYNEASGGKYVPRA +VDLEPGTMDSVR+GPFGQ+FRPDNFVF
Sbjct: 46 RINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVF 92
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQL
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL 44
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 97.1 bits (231), Expect = 4e-21
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 397
RI+VYYNEA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVF
Sbjct: 46 RIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVF 92
Score = 83.4 bits (197), Expect = 5e-17
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQL
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL 44
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 97.1 bits (231), Expect = 4e-21
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 397
RI+VYYNEA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVF
Sbjct: 46 RIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVF 92
Score = 82.2 bits (194), Expect = 1e-16
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQL
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL 44
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 95.1 bits (226), Expect = 2e-20
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 397
RINVYYNEA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VF
Sbjct: 46 RINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVF 92
Score = 89.0 bits (211), Expect = 1e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQL
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL 44
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 95.1 bits (226), Expect = 2e-20
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 397
RINVYYNEA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VF
Sbjct: 46 RINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVF 92
Score = 89.0 bits (211), Expect = 1e-18
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQL
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL 44
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 74.1 bits (174), Expect = 3e-14
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQG 290
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QL S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 56.8 bits (131), Expect = 5e-09
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
RI YY E G KYVPRA++VDL+P +++ VRS +G++F P+N V
Sbjct: 46 RITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAV 91
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 74.1 bits (174), Expect = 3e-14
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQG 290
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QL S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 56.8 bits (131), Expect = 5e-09
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
RI YY E G KYVPRA++VDL+P +++ VRS +G++F P+N V
Sbjct: 46 RITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAV 91
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 55.2 bits (127), Expect = 2e-08
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
+ +++E+ GK+VPRA+ VDLEP +D +R+G +G +F PD +
Sbjct: 52 LQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQII 96
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
RE V I GQ G QIG WE+ EHG+D G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 53.6 bits (123), Expect = 5e-08
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
N +++E GK+VPRA+ VDLEP +D VR+G + ++F P+ +
Sbjct: 50 NTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLI 93
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 242
MREIV I GQ G QIG WE+ EHGI G D+
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDT 40
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 52.8 bits (121), Expect = 9e-08
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+ +
Sbjct: 55 INTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLL 99
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
RE++ I GQ G QIG WE+ EHGI G + D
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVED 45
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 52.8 bits (121), Expect = 9e-08
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+ +
Sbjct: 27 INTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLL 71
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 52.4 bits (120), Expect = 1e-07
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
N +++E GK+VPRA+MVDLEP +D +R+G + +F P+ +
Sbjct: 55 NTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLL 98
Score = 36.7 bits (81), Expect = 0.006
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE++ I GQ G Q+G WE+ EHGI G + + L
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSL 47
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 51.6 bits (118), Expect = 2e-07
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+ +
Sbjct: 50 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLI 93
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 51.6 bits (118), Expect = 2e-07
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+ +
Sbjct: 49 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLI 92
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 41
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 51.6 bits (118), Expect = 2e-07
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+ +
Sbjct: 50 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLI 93
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 51.6 bits (118), Expect = 2e-07
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+ +
Sbjct: 50 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLI 93
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 48.8 bits (111), Expect = 1e-06
Identities = 15/42 (35%), Positives = 30/42 (71%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ +
Sbjct: 50 FFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMI 91
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 48.8 bits (111), Expect = 1e-06
Identities = 15/42 (35%), Positives = 30/42 (71%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ +
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMI 91
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE++ I GQ G QIG WE+ EHGI G D
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSD 39
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 48.8 bits (111), Expect = 1e-06
Identities = 15/42 (35%), Positives = 30/42 (71%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ +
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMI 91
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE++ I GQ G QIG WE+ EHGI G D
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSD 39
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 48.8 bits (111), Expect = 1e-06
Identities = 15/42 (35%), Positives = 30/42 (71%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ +
Sbjct: 50 FFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMI 91
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 48.4 bits (110), Expect = 2e-06
Identities = 15/42 (35%), Positives = 30/42 (71%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ +
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMI 91
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 48.4 bits (110), Expect = 2e-06
Identities = 15/42 (35%), Positives = 30/42 (71%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
++++ G+YVPR++ VDLEP +D +R+G + ++F P+ +
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMI 91
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 45.6 bits (103), Expect = 1e-05
Identities = 14/45 (31%), Positives = 31/45 (68%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFV 394
+ ++++ G++VPR++ VDLEP +D +R+G + ++F P+ +
Sbjct: 46 LGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQML 90
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGI 212
MRE++ I GQ G QIG WE+ EHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 42.7 bits (96), Expect = 9e-05
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 132 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDN 388
++ + +A YVPRAV+VDLEP ++ + P F +F DN
Sbjct: 50 DLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDN 92
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 42.7 bits (96), Expect = 9e-05
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 132 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDN 388
++ + +A YVPRAV+VDLEP ++ + P F +F DN
Sbjct: 50 DLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDN 92
>AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical
protein C27A12.9 protein.
Length = 883
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 168 IGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITK 281
IG + SD+HG+ +TG + G+S+ ++ A + +K
Sbjct: 245 IGQTIETMKSDDHGMTSTGDHGGESENEIRAGILVHSK 282
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 79 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLT 258
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAVC 123
Query: 259 HQ 264
++
Sbjct: 124 YK 125
>Z77133-3|CAB00868.2| 149|Caenorhabditis elegans Hypothetical
protein K03A11.5 protein.
Length = 149
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 134 DFPHDCTKNLEPPESN 87
D+P+D KNL P ESN
Sbjct: 42 DYPYDICKNLYPRESN 57
>AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical
protein Y113G7B.18 protein.
Length = 728
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 212 NAVLVRDYFPELCSDLIPALTRLDV 138
N +L+RD F +C+D I RL +
Sbjct: 396 NTLLLRDVFKTICTDAIKLRNRLSI 420
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,143,492
Number of Sequences: 27780
Number of extensions: 207567
Number of successful extensions: 621
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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