Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1202
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 157 6e-39
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 157 6e-39
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 157 6e-39
03_01_0034 + 318432-318825,318902-319851 157 6e-39
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 157 6e-39
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 157 6e-39
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 157 6e-39
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 156 8e-39
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 94 5e-20
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 90 1e-18
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 90 1e-18
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 88 4e-18
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 62 2e-10
07_03_0678 - 20637931-20638016,20638187-20639753 32 0.22
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 29 2.1
05_03_0626 - 16335816-16335917,16336331-16336558,16336694-163369... 29 2.7
09_06_0153 - 21243108-21245660 27 6.3
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 157 bits (380), Expect = 6e-39
Identities = 69/87 (79%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 100 bits (239), Expect = 7e-22
Identities = 46/76 (60%), Positives = 55/76 (72%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDIPP GLKMA
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 157 bits (380), Expect = 6e-39
Identities = 69/87 (79%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 414 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 473
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 474 WDAKNMMCAADPRHGRYLTASAMFRGK 500
Score = 101 bits (242), Expect = 3e-22
Identities = 46/76 (60%), Positives = 55/76 (72%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDIPPRGL MA
Sbjct: 498 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEM 557
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 558 FRRVSEQFTAMFRRKA 573
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 157 bits (380), Expect = 6e-39
Identities = 69/87 (79%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 103 bits (247), Expect = 8e-23
Identities = 47/76 (61%), Positives = 56/76 (73%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDIPPRGLKMA
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 157 bits (380), Expect = 6e-39
Identities = 69/87 (79%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 100 bits (240), Expect = 6e-22
Identities = 46/76 (60%), Positives = 54/76 (71%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMA
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 157 bits (380), Expect = 6e-39
Identities = 69/87 (79%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 101 bits (242), Expect = 3e-22
Identities = 46/76 (60%), Positives = 55/76 (72%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDIPP GLKMA
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 157 bits (380), Expect = 6e-39
Identities = 69/87 (79%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 255 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 314
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 315 WDAKNMMCAADPRHGRYLTASAMFRGK 341
Score = 101 bits (242), Expect = 3e-22
Identities = 46/76 (60%), Positives = 55/76 (72%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDIPPRGL MA
Sbjct: 339 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEM 398
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 399 FRRVSEQFTAMFRRKA 414
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 157 bits (380), Expect = 6e-39
Identities = 69/87 (79%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 101 bits (242), Expect = 3e-22
Identities = 46/76 (60%), Positives = 55/76 (72%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDIPPRGL MA
Sbjct: 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 156 bits (379), Expect = 8e-39
Identities = 69/86 (80%), Positives = 78/86 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 250 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 309
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRG 259
+DAKNMM A DPRHGRYLT + +FRG
Sbjct: 310 WDAKNMMCAADPRHGRYLTASAMFRG 335
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/76 (60%), Positives = 54/76 (71%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+GRMS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDIPP GL MA
Sbjct: 334 RGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEM 393
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 394 FRRVSEQFTAMFRRKA 409
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 94.3 bits (224), Expect = 5e-20
Identities = 39/103 (37%), Positives = 63/103 (61%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + L+VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAV 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 338
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 338
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 338
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 87.8 bits (208), Expect = 4e-18
Identities = 36/103 (34%), Positives = 62/103 (60%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + +VPE+T +
Sbjct: 317 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSV 376
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ ++M CDPRHG+Y+ ++RG+ + K + + +T+
Sbjct: 377 FEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTR 419
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ + +I+ + + FV+W P K + PP
Sbjct: 397 CLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 441
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 62.1 bits (144), Expect = 2e-10
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLT-SRGAQQYRALTVPELTLQ 178
S TT LR+PG +N DL L +++P PR HF G+ PLT R R TV ++ +
Sbjct: 237 SASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRR 296
Query: 179 MFDAKNMMVACDPRH-----GRYLTVATIFRGE 262
+ KN+MV+ R+ +Y+++ I +GE
Sbjct: 297 LLQTKNIMVSSYARNKEASQAKYISILNIIQGE 329
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 250 IQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIA 357
IQG + +V E L I+ + F+EW P + +++
Sbjct: 326 IQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVS 361
>07_03_0678 - 20637931-20638016,20638187-20639753
Length = 550
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -1
Query: 286 ARQLLS*TFAPEYRRNGQIPPVSRITRDHHVFGVEHLQRQ 167
A L++ TFA ++ R G + V RI R+ GVE LQ Q
Sbjct: 467 ADALVTDTFARDFARRGMLAYVERIQREERSNGVETLQHQ 506
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 158 QLKLDTVEL-LATSAAQSQGCRNAGAETAPC 69
+L+LD + L+T+AA QGC A A TA C
Sbjct: 352 ELELDELPADLSTTAAACQGCNFAAATTAAC 382
>05_03_0626 -
16335816-16335917,16336331-16336558,16336694-16336973,
16337596-16338560
Length = 524
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 61 GCEHGAVSAPAFLHPWLCAADVARSSTVSSFNCTRADAANVRRQKH 198
G +SAP PW+ AD R + RA AN +RQ H
Sbjct: 14 GLRFNPLSAPP---PWMLLADHGRGDEAAFLEDARAKNANGKRQNH 56
>09_06_0153 - 21243108-21245660
Length = 850
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 58 VGCEHGAVSAPAFLHPWLCAADVARSS-TVSSFNCTRADAANVRRQKHDGRV*SSTREVF 234
+ C HGA APA L A R+ T+ + A +V +++ RV S + +
Sbjct: 467 LACVHGARGAPAMLSLLELLATTPRAQPTIHVLHLFDASRKHVGPKRYHQRVQDSDKHID 526
Query: 235 DRCDD 249
R DD
Sbjct: 527 RRIDD 531
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,495,794
Number of Sequences: 37544
Number of extensions: 262569
Number of successful extensions: 838
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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