Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1202
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 174 4e-44
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 174 4e-44
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 168 2e-42
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 140 4e-34
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 111 2e-25
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 5e-20
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 93 9e-20
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 93 2e-19
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 3e-19
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 92 3e-19
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 91 4e-19
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 91 4e-19
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 5e-19
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 91 5e-19
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 91 5e-19
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 91 5e-19
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 84 7e-17
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 62 3e-10
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 57 9e-09
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 36 0.019
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 30 0.92
SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2) 29 2.1
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 29 2.8
SB_46315| Best HMM Match : Ribosomal_L14e (HMM E-Value=0.39) 27 6.5
SB_10929| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_48851| Best HMM Match : zf-C2H2 (HMM E-Value=3.2e-13) 27 6.5
SB_37732| Best HMM Match : RVT_1 (HMM E-Value=2e-23) 27 6.5
SB_28157| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 174 bits (423), Expect = 4e-44
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRG 259
FDAKNMM ACDPRHGRYLTVA +FRG
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRG 319
Score = 108 bits (259), Expect = 3e-24
Identities = 49/76 (64%), Positives = 57/76 (75%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+GRMSMKEVDEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM+
Sbjct: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 433 XKRVSEQFVAMFRXES 480
KR+SEQF AMFR ++
Sbjct: 378 FKRISEQFTAMFRRKA 393
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 174 bits (423), Expect = 4e-44
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRG 259
FDAKNMM ACDPRHGRYLTVA +FRG
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRG 319
Score = 108 bits (259), Expect = 3e-24
Identities = 49/76 (64%), Positives = 57/76 (75%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+GRMSMKEVDEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM+
Sbjct: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 433 XKRVSEQFVAMFRXES 480
KR+SEQF AMFR ++
Sbjct: 378 FKRISEQFTAMFRRKA 393
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 168 bits (409), Expect = 2e-42
Identities = 78/93 (83%), Positives = 83/93 (89%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRL F+ PGFAPLTSRG+QQYRALTVPELT QM
Sbjct: 179 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLPFFMPGFAPLTSRGSQQYRALTVPELTQQM 238
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKL 280
FDAKNMM ACDP HGRYLTVA +FRG K+L
Sbjct: 239 FDAKNMMAACDPLHGRYLTVAAMFRGRMSMKEL 271
Score = 107 bits (256), Expect = 7e-24
Identities = 48/76 (63%), Positives = 57/76 (75%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+GRMSMKE+DEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM+
Sbjct: 263 RGRMSMKELDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 322
Query: 433 XKRVSEQFVAMFRXES 480
KR+SEQF AMFR ++
Sbjct: 323 FKRISEQFTAMFRRKA 338
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 140 bits (340), Expect = 4e-34
Identities = 60/86 (69%), Positives = 74/86 (86%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+TTCLRFPGQLNADLRKLAVNM+P+PRLHF+ PGFAPLTSR YRALTV +LT +
Sbjct: 139 SGLTTCLRFPGQLNADLRKLAVNMIPYPRLHFFMPGFAPLTSRECVSYRALTVADLTQAI 198
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRG 259
FD KN+++AC+P+ G+YLT A ++RG
Sbjct: 199 FDNKNLLIACNPKRGKYLTYAAMYRG 224
Score = 71.7 bits (168), Expect = 3e-13
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G MSMKEV++Q+A Q++ S+ FV+WIPNN K+AVCD+PP +KM+
Sbjct: 223 RGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPPHDMKMSASCISSNTAIQEL 282
Query: 433 XKRVSEQFVAMFR 471
KR+ + MFR
Sbjct: 283 FKRIRLHYKLMFR 295
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 111 bits (268), Expect = 2e-25
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = +2
Query: 71 MVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFDAKNMMVACDPRHGRYLTVATI 250
MVPFPRLHF+ PGFAPL SR QQY+ ++V ELT QMFDA+NMM ACDPRHGRYLTVA I
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLTVAAI 60
Query: 251 FRGE 262
FRG+
Sbjct: 61 FRGK 64
Score = 83.8 bits (198), Expect = 7e-17
Identities = 39/68 (57%), Positives = 44/68 (64%)
Frame = +1
Query: 277 VDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXXXKRVSEQF 456
VDEQ+ N QNKNS +FVEWIPNN K VCDI P+GLKMA KRV EQF
Sbjct: 153 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 212
Query: 457 VAMFRXES 480
AMFR ++
Sbjct: 213 TAMFRRKA 220
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 95.1 bits (226), Expect = 3e-20
Identities = 43/103 (41%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 221 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITTSC 280
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ +FRG+ + K + + +TK
Sbjct: 281 FEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTK 323
Score = 80.6 bits (190), Expect = 7e-16
Identities = 35/91 (38%), Positives = 53/91 (58%)
Frame = +2
Query: 38 LNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFDAKNMMVACDP 217
LN DL + N+VP+PR+HF +AP+ S + +TV +LT F+ N MV CDP
Sbjct: 664 LNVDLMEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDP 723
Query: 218 RHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
RHG+Y+ +FRG+ + K + + +TK
Sbjct: 724 RHGKYMACCLLFRGDVVPKDVNAAIATIKTK 754
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 301 CLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 345
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 732 CLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 776
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 94.3 bits (224), Expect = 5e-20
Identities = 42/103 (40%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 607 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMASYAPVVSAEKAYHEQLTVADITNSC 666
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + S +TK
Sbjct: 667 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTK 709
Score = 61.3 bits (142), Expect = 4e-10
Identities = 29/67 (43%), Positives = 38/67 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 1040 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNAC 1099
Query: 182 FDAKNMM 202
F+ N M
Sbjct: 1100 FEPANQM 1106
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
+G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 691 RGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGINYQPP 731
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 226 EVFDRCDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
E+ + C + +M +V+ +A I+ K + FV+W P K+ + PP
Sbjct: 1094 EITNACFEPANQM---DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 1140
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 93.5 bits (222), Expect = 9e-20
Identities = 42/103 (40%), Positives = 61/103 (59%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + S+ +TK
Sbjct: 296 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSSIATIKTK 338
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
+G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 320 RGDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/103 (40%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNAC 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 338
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
+G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 320 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/103 (40%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 669 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNAC 728
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 729 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 771
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 338
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
+G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 753 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 793
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + +TV +LT
Sbjct: 201 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNAC 260
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 261 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 303
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
+G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 285 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 325
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 91.9 bits (218), Expect = 3e-19
Identities = 42/103 (40%), Positives = 59/103 (57%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 161 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNSC 220
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + R K
Sbjct: 221 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIRPK 263
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
+G + K+V+ +A I+ K + F +W P K+ + PP
Sbjct: 245 RGDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVGINSQPP 285
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 91.5 bits (217), Expect = 4e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 34 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNAC 93
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 94 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 136
Score = 30.3 bits (65), Expect = 0.92
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAV 360
+G + K+V+ +A I+ K + FV+W P K+ +
Sbjct: 118 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 153
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 91.5 bits (217), Expect = 4e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 235 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNAC 294
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 295 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 337
Score = 30.3 bits (65), Expect = 0.92
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAV 360
+G + K+V+ +A I+ K + FV+W P K+ +
Sbjct: 319 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 354
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 173 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 232
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 233 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 275
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 253 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 297
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 300 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 359
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 360 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 402
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 821 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 880
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 881 FEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTK 923
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 380 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 424
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
+G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 905 RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 945
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 161 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 220
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 221 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 263
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 241 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 285
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/103 (39%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 34 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNAC 93
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ N MV CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 94 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 136
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 114 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 158
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 90.6 bits (215), Expect = 6e-19
Identities = 39/87 (44%), Positives = 54/87 (62%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S IT+ LRF G LN DL + N+VP+PR+HF +AP+ S + LTV ++T
Sbjct: 1147 SSITSSLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISPEKAYHEQLTVAQITNMC 1206
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
FD N MV CDPRHG+Y+ ++RG+
Sbjct: 1207 FDPNNQMVKCDPRHGKYMACCMLYRGD 1233
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 85.8 bits (203), Expect = 2e-17
Identities = 36/95 (37%), Positives = 56/95 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN DL + N+VP+PR+HF +AP+ + ++V E+T
Sbjct: 367 SSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIGADKAYHENMSVAEITSAC 426
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTS 286
F+ N MV CDPR+G+Y+ ++RG+ + K + S
Sbjct: 427 FEPSNQMVKCDPRYGKYMACCLLYRGDVVPKDVNS 461
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 83.8 bits (198), Expect = 7e-17
Identities = 39/68 (57%), Positives = 44/68 (64%)
Frame = +1
Query: 277 VDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXXXKRVSEQF 456
VDEQ+ N QNKNS +FVEWIPNN K VCDI P+GLKMA KRV EQF
Sbjct: 91 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQF 150
Query: 457 VAMFRXES 480
AMFR ++
Sbjct: 151 TAMFRRKA 158
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/57 (50%), Positives = 35/57 (61%)
Frame = +1
Query: 301 QNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXXXKRVSEQFVAMFR 471
Q+ +S+ FVEWIPNN K AVCD+PP GLK A +R +EQF AMFR
Sbjct: 153 QDSHSSSFVEWIPNNMKTAVCDVPPVGLKNAATFLYNSTAIQEAFRRFTEQFAAMFR 209
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +2
Query: 8 ITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQMFD 187
+T+ RF G LN DL ++ +N+VPFP+LH+ PL + + + ++ F
Sbjct: 285 MTSSARFEGSLNVDLNEITMNLVPFPKLHYLVSSQTPLYALTDVKLPPRRLDQMFTDAFS 344
Query: 188 AKNMMVACDPRHGRYLTVATIFRG 259
+ ++ DP+H YL A I RG
Sbjct: 345 KDHQLIKADPKHNLYLACALILRG 368
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 274 EVDEQLANIQN-KNSTYFVEWIPNNCKIAVCDIPPRG 381
EV + NI+ K S F+ W K +C +PP G
Sbjct: 371 EVSDIRRNIERLKPSLKFIHWNQEGWKTGLCSVPPVG 407
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 56.8 bits (131), Expect = 9e-09
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELT 172
S +T LRF G LN DL + N+VP+PR+HF +AP+ S + LTV E+T
Sbjct: 226 SSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 282
Score = 34.3 bits (75), Expect = 0.057
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
+G + +K+V+ +A I+ K + FV+W P K+ + PP
Sbjct: 304 EGDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 344
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 48.8 bits (111), Expect = 2e-06
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +2
Query: 11 TTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTS 127
TT LR+PG +N DL L +++P PRLHF G+ PLT+
Sbjct: 276 TTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTT 314
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 35.9 bits (79), Expect = 0.019
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFP 85
S IT LRF G LN DL + N+VP+P
Sbjct: 111 SSITASLRFDGALNVDLTEFQTNLVPYP 138
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 30.3 bits (65), Expect = 0.92
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 2 SGITTCLRFPGQ 37
SG+TTCLRFPGQ
Sbjct: 447 SGVTTCLRFPGQ 458
>SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2)
Length = 341
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 101 TPGFAPLTSRGAQQYRALTVPELTLQMFDAKNM--MVACDPRHGRYLTVA 244
+PG+ L++ G+ Q T P +T +M+ K +A P R+ T+A
Sbjct: 117 SPGYLSLSAFGSPQVSRSTTPGITYEMYGVKERGNSLAARPATSRHATLA 166
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 196 HDGRV*SSTREVFDRCDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIA-VCD 366
HDGR+ +S E D DI +M E E++ +Q T+ V W PN +A CD
Sbjct: 285 HDGRMLASGSE--DLIIDI----AMVETGERICEVQCHAPTFTVAWHPNKPLLAFACD 336
>SB_46315| Best HMM Match : Ribosomal_L14e (HMM E-Value=0.39)
Length = 310
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 242 ATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP 358
A F C + + NW+IF+T + + YP+ P
Sbjct: 164 AASFMRNCSQRSVHENWQIFKTTILSLANKHYPVKILKP 202
>SB_10929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 242 ATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP 358
A F C + + NW+IF+T + + YP+ P
Sbjct: 464 AASFMRNCSQRSVHENWQIFKTTILSLANKHYPVKILKP 502
>SB_48851| Best HMM Match : zf-C2H2 (HMM E-Value=3.2e-13)
Length = 169
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Frame = +1
Query: 112 CAADVARSSTVSSFNCTRADAA--NVRRQKHDG-RV*SSTREVFDRCDDIQGRMSMKEVD 282
C ++S + C D A N R+ H G R + RC D+ + + +
Sbjct: 49 CGKHFSQSGQLRRHICDHCDRAFLNQHRKIHSGVRPHKCENSLITRCGDLNKHLKIHSGE 108
Query: 283 EQLANIQNKNSTYFVEWIPNNCKI 354
+ L ++ S Y +++ + KI
Sbjct: 109 KPLQCVERGKSFYRSDYLKQHVKI 132
>SB_37732| Best HMM Match : RVT_1 (HMM E-Value=2e-23)
Length = 951
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 242 ATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP 358
A F C + + NW+IF+T + + YP+ P
Sbjct: 349 AASFMRNCSQRSVHENWQIFKTTILSLANKHYPVKILKP 387
>SB_28157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +2
Query: 242 ATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP 358
A F C + NW+IF+T + + YP+ P
Sbjct: 144 AAFFMQNCSQSSVHENWQIFKTTILSLANKHYPVKILKP 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,826,593
Number of Sequences: 59808
Number of extensions: 312306
Number of successful extensions: 925
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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