Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1202
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 157 5e-39
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 155 1e-38
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 154 3e-38
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 154 3e-38
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 154 3e-38
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 154 4e-38
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 153 5e-38
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 149 1e-36
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 148 2e-36
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 95 2e-20
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 95 3e-20
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 95 3e-20
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 88 4e-18
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 88 4e-18
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 88 4e-18
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 88 4e-18
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 1e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 1e-10
At3g21720.1 68416.m02740 isocitrate lyase, putative similar to i... 31 0.43
At3g21420.1 68416.m02703 oxidoreductase, 2OG-Fe(II) oxygenase fa... 30 0.75
At1g44900.1 68414.m05144 DNA replication licensing factor, putat... 27 5.3
At5g10530.1 68418.m01219 lectin protein kinase, putative similar... 27 7.0
At3g28650.1 68416.m03576 DC1 domain-containing protein similar ... 27 7.0
At3g56000.1 68416.m06222 glycosyl transferase family 2 protein s... 27 9.3
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 157 bits (380), Expect = 5e-39
Identities = 69/87 (79%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 100 bits (240), Expect = 5e-22
Identities = 46/76 (60%), Positives = 54/76 (71%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMA
Sbjct: 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 155 bits (377), Expect = 1e-38
Identities = 68/87 (78%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYRALTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+D+KNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGK 320
Score = 98.3 bits (234), Expect = 3e-21
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDI PRGL MA
Sbjct: 318 RGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 154 bits (374), Expect = 3e-38
Identities = 67/87 (77%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR+LTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+D+KNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGK 320
Score = 100 bits (240), Expect = 5e-22
Identities = 46/76 (60%), Positives = 54/76 (71%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMA
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 154 bits (374), Expect = 3e-38
Identities = 67/87 (77%), Positives = 79/87 (90%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR+LTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+D+KNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDSKNMMCAADPRHGRYLTASAMFRGK 320
Score = 100 bits (240), Expect = 5e-22
Identities = 46/76 (60%), Positives = 54/76 (71%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMA
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 154 bits (374), Expect = 3e-38
Identities = 68/87 (78%), Positives = 78/87 (89%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQYR LTVPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAMFRGK 320
Score = 100 bits (240), Expect = 5e-22
Identities = 46/76 (60%), Positives = 54/76 (71%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K VCDIPP GLKMA
Sbjct: 318 RGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 154 bits (373), Expect = 4e-38
Identities = 69/105 (65%), Positives = 84/105 (80%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY AL+VPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTA 316
+DAKNMM A DPRHGRYLT + +FRG+ K++ + K +
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNS 338
Score = 98.3 bits (234), Expect = 3e-21
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G++S KEVDEQ+ NIQNKNS+YFVEWIPNN K +VCDI P+GLKMA
Sbjct: 318 RGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 153 bits (372), Expect = 5e-38
Identities = 67/87 (77%), Positives = 78/87 (89%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T CLRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY AL+VPELT QM
Sbjct: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQM 293
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 294 WDAKNMMCAADPRHGRYLTASAVFRGK 320
Score = 97.9 bits (233), Expect = 3e-21
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDI P GLKMA
Sbjct: 318 RGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKMASTFIGNSTSIQEM 377
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 378 FRRVSEQFTAMFRRKA 393
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 149 bits (360), Expect = 1e-36
Identities = 66/87 (75%), Positives = 77/87 (88%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T LRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY +LTVPELT QM
Sbjct: 235 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 294
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+D+KNMM A DPRHGRYLT + IFRG+
Sbjct: 295 WDSKNMMCAADPRHGRYLTASAIFRGQ 321
Score = 102 bits (244), Expect = 2e-22
Identities = 47/76 (61%), Positives = 56/76 (73%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ NIQNKNS+YFVEWIPNN K +VCDIPP+GLKMA
Sbjct: 319 RGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAATFVGNSTSIQEM 378
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 379 FRRVSEQFTAMFRRKA 394
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 148 bits (359), Expect = 2e-36
Identities = 66/87 (75%), Positives = 77/87 (88%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
SG+T LRFPGQLN+DLRKLAVN++PFPRLHF+ GFAPLTSRG+QQY +LTVPELT QM
Sbjct: 235 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 294
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGE 262
+DAKNMM A DPRHGRYLT + +FRG+
Sbjct: 295 WDAKNMMCAADPRHGRYLTASAMFRGK 321
Score = 100 bits (239), Expect = 6e-22
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMAXXXXXXXXXXXXX 432
+G+MS KEVDEQ+ N+QNKNS+YFVEWIPNN K +VCDIPP G+KMA
Sbjct: 319 RGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSIQEM 378
Query: 433 XKRVSEQFVAMFRXES 480
+RVSEQF AMFR ++
Sbjct: 379 FRRVSEQFTAMFRRKA 394
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.1 bits (226), Expect = 2e-20
Identities = 37/95 (38%), Positives = 59/95 (62%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + +VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSV 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTS 286
F+ NMM CDPRHG+Y+ ++RG+ + K + +
Sbjct: 296 FEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNT 330
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ +A I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPP 360
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 94.7 bits (225), Expect = 3e-20
Identities = 39/103 (37%), Positives = 63/103 (61%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + L+VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAV 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ + I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 94.7 bits (225), Expect = 3e-20
Identities = 39/103 (37%), Positives = 63/103 (61%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +TT LRF G +N D+ + N+VP+PR+HF +AP+ S + L+VPE+T +
Sbjct: 236 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAV 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ + I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 87.8 bits (208), Expect = 4e-18
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ + I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPP 360
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 87.8 bits (208), Expect = 4e-18
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ + I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPP 360
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 87.8 bits (208), Expect = 4e-18
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ + I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPP 360
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 87.8 bits (208), Expect = 4e-18
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTLQM 181
S +T LRF G LN D+ + N+VP+PR+HF +AP+ S + L+V E+T
Sbjct: 236 SSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSA 295
Query: 182 FDAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F+ +MM CDPRHG+Y+ ++RG+ + K + + +TK
Sbjct: 296 FEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTK 338
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPP 375
C +G + K+V+ + I+ K + FV+W P K + PP
Sbjct: 316 CLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPP 360
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 1e-10
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLT-SRGAQQYRALTVPELTLQ 178
S TT LR+PG +N DL L +++P PR HF G+ PLT R A R TV ++ +
Sbjct: 237 SASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRR 296
Query: 179 MFDAKNMMVACDPRH-----GRYLTVATIFRGE 262
+ KN+MV+ R+ +Y+++ I +GE
Sbjct: 297 LLQTKNIMVSSYARNKEASQAKYISILNIIQGE 329
Score = 30.7 bits (66), Expect = 0.57
Identities = 19/86 (22%), Positives = 36/86 (41%)
Frame = +1
Query: 118 ADVARSSTVSSFNCTRADAANVRRQKHDGRV*SSTREVFDRCDDIQGRMSMKEVDEQLAN 297
A+V R +TV N+ + +S + + IQG + +V E L
Sbjct: 282 ANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQR 341
Query: 298 IQNKNSTYFVEWIPNNCKIAVCDIPP 375
I+ + F++W P + ++A+ P
Sbjct: 342 IRERKLVNFIDWGPASIQVALSKKSP 367
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 1e-10
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLT-SRGAQQYRALTVPELTLQ 178
S TT LR+PG +N DL L +++P PR HF G+ PLT R A R TV ++ +
Sbjct: 237 SASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRR 296
Query: 179 MFDAKNMMVACDPRH-----GRYLTVATIFRGE 262
+ KN+MV+ R+ +Y+++ I +GE
Sbjct: 297 LLQTKNIMVSSYARNKEASQAKYISILNIIQGE 329
Score = 31.9 bits (69), Expect = 0.25
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = +1
Query: 118 ADVARSSTVSSFNCTRADAANVRRQKHDGRV*SSTREVFDRCDDIQGRMSMKEVDEQLAN 297
A+V R +TV N+ + +S + + IQG + +V E L
Sbjct: 282 ANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQR 341
Query: 298 IQNKNSTYFVEWIPNNCKIAVCDIPP 375
I+ + F+EW P + ++A+ P
Sbjct: 342 IRERKLVNFIEWGPASIQVALSKKSP 367
>At3g21720.1 68416.m02740 isocitrate lyase, putative similar to
isocitrate lyase GI:167144 from [Brassica napus]
Length = 576
Score = 31.1 bits (67), Expect = 0.43
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 265 TFAPEYRRNGQIPPVSRITRDHHVFGVEHLQRQ 167
TFA +Y R G + V RI R+ GV+ L Q
Sbjct: 485 TFAKDYARRGMLAYVERIQREERTHGVDTLAHQ 517
>At3g21420.1 68416.m02703 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to SP|Q9ZWQ9 Flavonol synthase
(EC 1.14.11.-) {Citrus unshiu}; contains Pfam profile
PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 364
Score = 30.3 bits (65), Expect = 0.75
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 106 RGVEMQARKRHHVHSQLPQISVQLSRKP 23
RGV + + K HH+H Q+P I + KP
Sbjct: 39 RGVVVSSLKTHHLHHQIPVIDLSKLSKP 66
>At1g44900.1 68414.m05144 DNA replication licensing factor, putative
similar to DNA replication licensing factor MCM2 from
{Xenopus laevis} SP|P55861, SP|P49736 {Homo sapiens};
contains Pfam profile PF00493: MCM2/3/5 family
Length = 928
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 205 RV*SSTREVFDRCDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAV 360
R+ + RE R D+++ ++ K D L ++ KN +E++PN C + +
Sbjct: 200 RIQGTLREWVMR-DEVRRFIAKKFKDFLLTYVKPKNENGDIEYVPNKCSLEI 250
>At5g10530.1 68418.m01219 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 651
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 255 LNIVATVKYLPCRGSHATIMFLASNICSVSSG 160
LN+ A V +LP + AT +SN SVSSG
Sbjct: 607 LNLEAPVPHLPTKMPVATYHVSSSNTTSVSSG 638
>At3g28650.1 68416.m03576 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 665
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Frame = -2
Query: 456 ELLRHPLEYGLYXRRVTNEGXSHF--------KTPRRYVTHGNLAVIGYPLDKIRAVFVL 301
++ HP G Y + +T H K +R + H ++ + +D I F
Sbjct: 55 DIFDHPSHVGHYLKLLTTGAPDHTDPKCHLCGKNTKRILYHCSICKLNLDIDCIFDYF-- 112
Query: 300 NIRQLLVNFFHRHSPLNIVATVKYLPC 220
+ +Q +NF H PL+ ++ +L C
Sbjct: 113 SDQQAHLNFSWHHHPLHFISFRLHLQC 139
>At3g56000.1 68416.m06222 glycosyl transferase family 2 protein
similar to beta-(1-3)-glucosyl transferase GB:AAC62210
GI:3687658 from [Bradyrhizobium japonicum], cellulose
synthase from Agrobacterium tumeficiens [gi:710492] and
Agrobacterium radiobacter [gi:710493]; contains Pfam
glycosyl transferase, group 2 family protein domain
PF00535
Length = 535
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 351 LAVIGYPLDKIRAVFVLNIRQLLVN 277
L VIGY L++ R +F++ I + LVN
Sbjct: 15 LGVIGYVLEQTRFIFLVPILKRLVN 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,622,798
Number of Sequences: 28952
Number of extensions: 204321
Number of successful extensions: 606
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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