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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1201
         (439 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55202| Best HMM Match : FIVAR (HMM E-Value=3.7)                     31   0.31 
SB_46288| Best HMM Match : Troponin (HMM E-Value=3.7)                  31   0.31 
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)              28   3.9  
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.1  
SB_3978| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-06)                  27   5.1  
SB_20137| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.8  
SB_18045| Best HMM Match : rve (HMM E-Value=0.25)                      27   6.8  
SB_52754| Best HMM Match : Pox_TAA1 (HMM E-Value=2.2)                  27   8.9  
SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  

>SB_55202| Best HMM Match : FIVAR (HMM E-Value=3.7)
          Length = 145

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 430 GQSADISQHPNHDSEQPPELLKDRGATTRSEAQRAL 323
           G    I+ HP H+S+Q  E+L + G  T  +A R +
Sbjct: 93  GVREHIAAHPGHESQQEKEILDENGLITTVDAARII 128


>SB_46288| Best HMM Match : Troponin (HMM E-Value=3.7)
          Length = 152

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 430 GQSADISQHPNHDSEQPPELLKDRGATTRSEAQRAL 323
           G    I+ HP H+S+Q  E+L + G  T  +A R +
Sbjct: 24  GVREHIAAHPGHESQQEKEILDENGLITTVDAARII 59


>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
          Length = 207

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 366 KTAVPRRGAKLNARSTSILVRGASLGNGDSVTSNAHR 256
           KTAVPRRG K      S++ R   + + + +TS  HR
Sbjct: 112 KTAVPRRGVK-GLPLNSVIRRLVDVHSSEGMTSARHR 147


>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1103

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 395 RQRTA-SRALERPRCHDAERSSTRALRPYSSEERRSGTE 282
           R+R A  RALER R  + ER   R    Y  E+RR   E
Sbjct: 605 RERIARERALERERERERERERERRRLEYMREQRRRQEE 643


>SB_3978| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-06)
          Length = 259

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 237 RLTDHLTTASNGSDSSSRGTEYST 166
           RLT++  +ASNGSD  +   E ST
Sbjct: 2   RLTNYTLSASNGSDDETSNKEVST 25


>SB_20137| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 435

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 420 PTFPNIRTTTANSLQSS*KTAVPRR 346
           PT PNI + T N+ Q++  T VPR+
Sbjct: 353 PTIPNITSATPNATQAT-NTQVPRK 376


>SB_18045| Best HMM Match : rve (HMM E-Value=0.25)
          Length = 364

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 439 ILSGQSADISQHPNHDSEQPPELLKD 362
           IL  Q+  + ++P   S +PP+ LKD
Sbjct: 324 ILEPQAQPVRRYPTRSSRRPPDYLKD 349


>SB_52754| Best HMM Match : Pox_TAA1 (HMM E-Value=2.2)
          Length = 347

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 400 NHDSEQPPELLKDRGATTRSEAQRALYVH 314
           NH      +  K  G  TR + QRA+Y+H
Sbjct: 160 NHKKRLVRDFAKLAGIETREKPQRAIYIH 188


>SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1512

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 410 PTSEPRQRTASRALERPRCHDAERSSTRALRPYSSEERRSGTET 279
           P S P++RT+S A        A  +S  +   YS+E   SG+E+
Sbjct: 867 PRSPPKRRTSSEAFYTEGLPLAPSTSLTSSSAYSTEGLASGSES 910


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,444,506
Number of Sequences: 59808
Number of extensions: 240775
Number of successful extensions: 696
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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