Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1199
(449 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 111 9e-24
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 88 7e-17
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 85 5e-16
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 80 2e-14
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 68 1e-10
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 66 3e-10
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 66 3e-10
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 59 4e-08
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 58 1e-07
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 53 3e-06
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 52 6e-06
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 51 1e-05
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 49 5e-05
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 47 2e-04
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 46 5e-04
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 42 0.005
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.006
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 39 0.058
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 35 0.71
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 33 2.2
UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain pro... 33 2.9
UniRef50_Q22D17 Cluster: Protein kinase domain containing protei... 32 5.0
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 32 5.0
UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella ... 32 6.6
UniRef50_A2Y547 Cluster: Putative uncharacterized protein; n=4; ... 31 8.8
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 111 bits (266), Expect = 9e-24
Identities = 61/127 (48%), Positives = 72/127 (56%)
Frame = +1
Query: 49 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 228
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 229 FXXXXXXXXXXXXXHSIWPRXSSPSTG*PATACTRRRGPRANSV*NVRTE*RRSRGTKKS 408
F + + + P ++ + ++ RGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 409 XVGAAFK 429
VGA K
Sbjct: 124 NVGAGKK 130
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 88.2 bits (209), Expect = 7e-17
Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = +1
Query: 37 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVXFVF 213
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 214 GFKTNF 231
F+T+F
Sbjct: 61 KFRTHF 66
Score = 55.6 bits (128), Expect = 5e-07
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +3
Query: 258 LIYDTLDLAKXFEPKHRLARHGLYEKKRPTRKQRIERKNRMKKV 389
LIYDT++ AK FEPK+RL R+GL K +RKQ ERKNR KK+
Sbjct: 76 LIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKI 119
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 85.4 bits (202), Expect = 5e-16
Identities = 37/58 (63%), Positives = 48/58 (82%)
Frame = +1
Query: 58 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNF 231
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+ F FGF+T+F
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHF 64
Score = 38.7 bits (86), Expect = 0.058
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 255 ALIYDTLDLAKXFEPKHRLARHGLYEKKRPTRKQRIERKNRMKKVXRYQE 404
AL+YD+LD AK FEP++RL R + P R++ ER + + + E
Sbjct: 73 ALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQKQGEEDSWHE 122
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 80.2 bits (189), Expect = 2e-14
Identities = 37/60 (61%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = +1
Query: 55 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVXFVFGFKTNF 231
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Score = 35.9 bits (79), Expect(2) = 0.001
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 192 SRCXVRIRFQDKLRRWQVNWIALIYDTLDLAKXFEPKHRLAR 317
S C +F+ + LIYD LD AK +EPK+RL R
Sbjct: 58 SNCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 28.3 bits (60), Expect(2) = 0.001
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 318 HGLYEKKRPTRKQRIERKNRMKKV 389
+GL K +RKQ ERKNR KK+
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKI 151
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = +1
Query: 55 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVXFVFGFKTNF 231
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Score = 41.9 bits (94), Expect = 0.006
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 258 LIYDTLDLAKXFEPKHRLARHGLYEKK-RPTRKQRIERKNRMKKV 389
LIY +D K FE K+RL R GL +K+ + R+ E KNR KKV
Sbjct: 75 LIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKV 119
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 66.5 bits (155), Expect = 3e-10
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = +1
Query: 55 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVXFVFGFKTNF 231
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Score = 40.7 bits (91), Expect = 0.014
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 192 SRCXVRIRFQDKLRRWQVNWIALIYDTLDLAKXFEPKHRLARHGLYEKKRPT-RKQRIER 368
+ C V F+ + + +IY+ + K FE ++R R G+ EK T RK R E
Sbjct: 80 ANCIVLFGFKTAFGGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKET 139
Query: 369 KNRMKKV 389
KNR KKV
Sbjct: 140 KNRRKKV 146
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 66.1 bits (154), Expect = 3e-10
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = +1
Query: 49 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 228
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 229 F 231
+
Sbjct: 62 Y 62
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 59.3 bits (137), Expect = 4e-08
Identities = 32/60 (53%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +1
Query: 55 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVF-GFKTNF 231
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV V GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +3
Query: 216 FQDKLRRWQVNWIALIYDTLDLAKXFEPKHRLARHGLYEKKRPTRKQRIERKNRMKKVXR 395
F K + + ALIYDTL K F PKH+L R GL +K + RK R E K + +
Sbjct: 64 FVTKYGGGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWRMCHS 123
Query: 396 YQE 404
+++
Sbjct: 124 FKD 126
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 57.6 bits (133), Expect = 1e-07
Identities = 32/76 (42%), Positives = 47/76 (61%)
Frame = -3
Query: 276 RVCRRSKQSS*LATSEVCLETEYEXYIGSNLVHFGELLTDLGLADGWFSWM*NIANHLLA 97
RV +K S ATS+V +T+++ I LVH +L +D L D F+WM I +HLLA
Sbjct: 58 RVVDHAKACS-FATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLA 116
Query: 96 RQQSVGHELASANSRC 49
Q+SV H+L+ ++S C
Sbjct: 117 LQKSVCHKLSCSDSHC 132
Score = 31.5 bits (68), Expect = 8.8
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -1
Query: 383 LHSVLTFYTLFARGPLLLVQAVAG*PVLGLEXLGQIECVVDQSNPVDLPPPKFVLK-PNT 207
LHSVL F+TL + LL++ + G V L ++ VVD + K K +
Sbjct: 21 LHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAKACSFATSKVSPKTKHK 80
Query: 206 NXTSGVTLYILASFSRISV 150
N G +++ FS S+
Sbjct: 81 NNIWGCLVHLCQLFSDFSL 99
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 52.8 bits (121), Expect = 3e-06
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +1
Query: 31 FKMSEGTATIRTRKFMTNRLLARKQMVCDVLHP-GKPTVSKTEIREKLAKMYKVTPDVXF 207
F+ + IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 208 V--FGFKTNF 231
V FGFKT F
Sbjct: 62 VSLFGFKTKF 71
Score = 44.0 bits (99), Expect = 0.002
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +3
Query: 216 FQDKLRRWQVNWIALIYDTLDLAKXFEPKHRLARHGLYEKKRPTRKQRIERKNRMKKV 389
F+ K + LIYD L K FEP +R R G + + P RK ER+NR KK+
Sbjct: 67 FKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKL 124
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 52.0 bits (119), Expect = 6e-06
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +3
Query: 258 LIYDTLDLAKXFEPKHRLARHGLYEKKRPTRKQRIERKNRMKKV 389
LIYD +D K FEPKHRL R GL + + +RK E+KNR+KK+
Sbjct: 82 LIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKNRVKKL 125
Score = 48.4 bits (110), Expect = 7e-05
Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 20/72 (27%)
Frame = +1
Query: 76 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 198
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 199 -VXFVFGFKTNF 231
+FGF+T F
Sbjct: 61 KCVSIFGFRTAF 72
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 50.8 bits (116), Expect = 1e-05
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 55 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNF 231
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+ +FG +T F
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKF 63
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 261 IYDTLDLAKXFEPKHRLARHGLYEKKRPTRKQRIERKNRMKKV 389
+YD+LD K EPKHRL + GL EK + TR+ R + + KV
Sbjct: 74 VYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKV 116
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 48.8 bits (111), Expect = 5e-05
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 58 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVXFVFGFKTNF 231
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P + F+FG K NF
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNF 68
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +3
Query: 261 IYDTLDLAKXFEPKHRLARHGLYEKKRPTRKQRIERKNRMKK 386
IY L+ A+ EPKHRL ++ L + + + KQR E+KN+MKK
Sbjct: 79 IYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKK 120
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +1
Query: 82 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNF 231
NRLL+RK++ HPG P SK EIREK++++Y+ D V K +
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRY 57
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 45.6 bits (103), Expect = 5e-04
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 49 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKT 225
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 226 NF 231
F
Sbjct: 94 TF 95
Score = 41.1 bits (92), Expect = 0.011
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 255 ALIYDTLDLAKXFEPKHRLARHGLYEKKRPTRKQRIERKNRMKK 386
ALIYDT FEPK RL R G+ K+ +RK E K+++KK
Sbjct: 104 ALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKK 147
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 42.3 bits (95), Expect = 0.005
Identities = 16/58 (27%), Positives = 34/58 (58%)
Frame = +1
Query: 58 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNF 231
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ F
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYF 60
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 41.9 bits (94), Expect = 0.006
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 106 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPD 198
MV +V+ PG+PT K +IREK+A Y + PD
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPD 31
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 38.7 bits (86), Expect = 0.058
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +1
Query: 46 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKT 225
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 226 NF 231
+
Sbjct: 96 QY 97
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 35.1 bits (77), Expect = 0.71
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 82 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNF 231
N+LLAR++++ + +H T ++ +RE +AK + FV KT F
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEF 63
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 33.5 bits (73), Expect = 2.2
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -1
Query: 248 VDLPPPKFVLKPNTNXTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVMNL 69
V PP+ V KP TN + TL +L F+ + ++ G P K+++ + + N + +
Sbjct: 6 VSCTPPRAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVRNTNKTL-V 64
Query: 68 RVRIVAVP 45
+V + VP
Sbjct: 65 QVNLTRVP 72
>UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain protein;
n=1; Microscilla marina ATCC 23134|Rep: Von Willebrand
factor type A domain protein - Microscilla marina ATCC
23134
Length = 1088
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1
Query: 272 CVVDQSNPVDLPPPKFVLKPNTNXTSGVTLYILASFSRISVLLTVGFPGCKTSQ 111
C D LPPPK V+K +TN GV + + F+ +++L + G +S+
Sbjct: 875 CDCDSYKIKQLPPPKIVIKTDTNY-QGVNMTSMKGFAHNNLMLLLDVSGSMSSK 927
>UniRef50_Q22D17 Cluster: Protein kinase domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila
SB210
Length = 389
Score = 32.3 bits (70), Expect = 5.0
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -1
Query: 281 QIECVVDQSNPVDLPPPKFVLKPNTNXTSGVTLYILASFSRISVLLTVGFPGCKTSQTIC 102
QI C ++QS + L + N N + + +LAS S L + +P KT Q+IC
Sbjct: 161 QINCDINQSKFLTLIKANQSNQTNQNYYQSIKVILLASLLA-SYLFSFIYPQIKTIQSIC 219
Query: 101 LRANNLL 81
L NL+
Sbjct: 220 LIHLNLI 226
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 32.3 bits (70), Expect = 5.0
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 82 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNF 231
N+++ RK++ V H G PT S+ +IR+ ++ D+ + T +
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGY 72
>UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 548
Score = 31.9 bits (69), Expect = 6.6
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -3
Query: 381 SFCSYVLYAVC--AWASSSRTGRGGLTCAWARTSWP 280
S C L+A C WA +++ +TC W R WP
Sbjct: 457 SGCGRPLHAECFRMWAVTAKKSGKDVTCVWCRNEWP 492
>UniRef50_A2Y547 Cluster: Putative uncharacterized protein; n=4;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 232
Score = 31.5 bits (68), Expect = 8.8
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -3
Query: 429 LEGRTYXRFLGTAXPSSFCSYVLYAVCAWASSSRTGRGGLTCAWARTSW 283
L GR R +A PSS S A A+ S+S TG T ++ SW
Sbjct: 55 LGGRAVSRPKSSAPPSSSASTTTTAAAAFTSTSTTGASATTVDSSKESW 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,832,130
Number of Sequences: 1657284
Number of extensions: 8200740
Number of successful extensions: 23630
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 22952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23609
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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