Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1198
         (647 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,778...    30   1.8  
11_06_0421 + 23331702-23331723,23332161-23332197,23333397-233335...    29   2.4  
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85...    29   4.2  
10_08_0233 - 16061182-16061714,16062765-16063578                       28   7.4  
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476...    28   7.4  

>11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,
            7782225-7782324,7782720-7782801,7782928-7782940,
            7783621-7783681
          Length = 1433

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -3

Query: 528  DRELAVCSSVVTSKYWKSFARAWTLTSLPS 439
            D  LAVC   +TS  W S  R   LTS PS
Sbjct: 992  DGALAVCLQGLTSLKWLSIERIMNLTSFPS 1021


>11_06_0421 +
           23331702-23331723,23332161-23332197,23333397-23333533,
           23333675-23334241,23335068-23335777,23335915-23336102,
           23336489-23336918
          Length = 696

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = -3

Query: 579 MISXGYIYSLFRDQMTDDRELAVCSSVVTSKYWKSFARAWTLTSLP--SRSLNLNLACWV 406
           +I  G I ++   +M   R  A C+S  +  +W  F R  ++   P    ++ L+ AC +
Sbjct: 600 VIGLGPIPNILCSEMFPTRARATCASFCSLAFW--FGRLLSIYCFPVMLSTIGLSGACAI 657

Query: 405 FALLCTVXCSF 373
           +A +C +   F
Sbjct: 658 YAFVCCLVLVF 668


>07_01_0115 +
           851505-852368,852611-852730,853000-853020,853253-853369,
           853466-853555,853730-853837,853897-853932,853933-854022
          Length = 481

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 240 YRFGSGTLKTAFDLMTTSLSSLGWKNPISAAIAS 139
           +R G  T   AFD MT   +S+   NP+ AA++S
Sbjct: 72  FRGGVATRSVAFDEMTPRRASVDVPNPLRAALSS 105


>10_08_0233 - 16061182-16061714,16062765-16063578
          Length = 448

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = -1

Query: 518 LRSALLL*PRNTGS--LSPEPGR*PPCPLEA*TSTWPAGSSPCFAXSXVPSKSITXTNGV 345
           + +A L+ PR + S  L P     PPC   A +      S P  A + +P+ S+T     
Sbjct: 1   MATAALIPPRQSASPCLVPHSHHQPPCHYRATSHVIGKASLPSVAHANLPTPSVTAFRCR 60

Query: 344 W 342
           W
Sbjct: 61  W 61


>08_02_0733 + 20546072-20546325,20546924-20547017,20547441-20547624,
            20547722-20547831,20548328-20548423,20548525-20548679,
            20548743-20548986,20549159-20549314,20549600-20549829,
            20552213-20552316,20552420-20552505,20552776-20553066,
            20553383-20553475,20553640-20553735,20553838-20553939,
            20554196-20554266,20554784-20555035,20555786-20556529,
            20557038-20557119,20557192-20557347,20557446-20557655,
            20558282-20558665
          Length = 1397

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +2

Query: 395  SKAKTQQAKLRFKLLEGKEVSVQALAKDFQYFEVTTEEQTASSLSSVIWSRKR 553
            S AK+Q  KL  +L +    S  +L       +   + + ASS SSV+WSR R
Sbjct: 1010 SAAKSQDNKLATQLNQ----STDSLLSSTPPLKKLRKSEEASSNSSVVWSRNR 1058


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,743,960
Number of Sequences: 37544
Number of extensions: 322699
Number of successful extensions: 678
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)