Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1198
         (647 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.8  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 639 PGYLAGKSAPWPMFFLSPDRMIS 571
           P  + GKS P  ++FLS +R +S
Sbjct: 580 PVTMKGKSEPMNVWFLSRERELS 602


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 639 PGYLAGKSAPWPMFFLSPDRMIS 571
           P  + GKS P  ++FLS +R +S
Sbjct: 580 PVTMKGKSEPMNVWFLSRERELS 602


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 297 QTXGRCXTNQIRFLGPNTICXG 362
           QT G C  N +    P  +C G
Sbjct: 215 QTIGTCVANAVVIEQPTFLCKG 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,947
Number of Sequences: 438
Number of extensions: 3642
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)