Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1195
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   4.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   4.8  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   4.8  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    20   8.3  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 178 QEWSDHYTCH 207
           Q+ + HYTCH
Sbjct: 77  QDHTTHYTCH 86


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 312 LRCIXGIPV 286
           LRC+ GIPV
Sbjct: 137 LRCVNGIPV 145


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 312 LRCIXGIPV 286
           LRC+ GIPV
Sbjct: 137 LRCVNGIPV 145


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -2

Query: 267 VFDIHSSYEVFP 232
           +FD+H + E++P
Sbjct: 90  IFDLHRNAEIYP 101


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 252 SSYEVFPVSDLASVAVA 202
           S Y+VFPV  L  +A A
Sbjct: 187 SVYKVFPVEHLLFIANA 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,695
Number of Sequences: 336
Number of extensions: 1527
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)