Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1195
         (349 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_57782| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   0.78 
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   1.8  
SB_35270| Best HMM Match : Jacalin (HMM E-Value=8.6)                   27   3.2  
SB_18767| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.2  
SB_31024| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-09)                 27   5.5  
SB_23919| Best HMM Match : Nanovirus_C8 (HMM E-Value=7.2)              27   5.5  
SB_5092| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   5.5  
SB_51664| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.3  
SB_47050| Best HMM Match : FATC (HMM E-Value=6.2)                      26   7.3  
SB_59805| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.7  
SB_21427| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.7  

>SB_57782| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 310

 Score = 29.5 bits (63), Expect = 0.78
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 119 SADRAGKTRQHNITNAPNCFPCCIL 45
           SA+   K R H+  N  +CF CCIL
Sbjct: 279 SANDKKKKRLHDSANQKSCFTCCIL 303



 Score = 27.5 bits (58), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 128 LTSSADRAGKTRQHNITNAPNCFPCCIL 45
           L S+ D+  K + H+  N  +CF CCIL
Sbjct: 69  LVSANDKKEK-KLHDSANQKSCFTCCIL 95



 Score = 27.5 bits (58), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 128 LTSSADRAGKTRQHNITNAPNCFPCCIL 45
           L S+ D+  K + H+  N  +CF CCIL
Sbjct: 147 LVSANDKKEK-KLHDSANQKSCFTCCIL 173



 Score = 27.5 bits (58), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 128 LTSSADRAGKTRQHNITNAPNCFPCCIL 45
           L S+ D+  K + H+  N  +CF CCIL
Sbjct: 199 LVSANDKKEK-KLHDSANQKSCFTCCIL 225



 Score = 27.5 bits (58), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 128 LTSSADRAGKTRQHNITNAPNCFPCCIL 45
           L S+ D+  K + H+  N  +CF CCIL
Sbjct: 251 LVSANDKKEK-KLHDSANQKSCFTCCIL 277



 Score = 25.8 bits (54), Expect = 9.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 125 TSSADRAGKTRQHNITNAPNCFPCCIL 45
           + +A+   + + H+  N  +CF CCIL
Sbjct: 17  SGTANDKKEKKLHDSANQKSCFTCCIL 43


>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1593

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 214 RCEIRDGKYFIAAVDVENQKYRITHWNATNTSK 312
           +C I  G+Y+I     + Q++R   WNA +T++
Sbjct: 497 QCNIIHGRYYIFHHKKDVQRHRYLVWNANDTTR 529


>SB_35270| Best HMM Match : Jacalin (HMM E-Value=8.6)
          Length = 211

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 121 DVSYQACVDKYSRKGYQPWQEWSDHYT 201
           D SY    D+    GY  WQ W+D +T
Sbjct: 144 DGSYPKPHDEALEAGYDSWQAWADAWT 170


>SB_18767| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 176

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 128 LTSSADRAGKTRQHNITNAPNCFPCCIL 45
           L S+ D+  K + H+  N  +CF CCIL
Sbjct: 50  LVSANDKKEK-KLHDSANQKSCFTCCIL 76



 Score = 27.5 bits (58), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 128 LTSSADRAGKTRQHNITNAPNCFPCCIL 45
           L S+ D+  K + H+  N  +CF CCIL
Sbjct: 128 LVSANDKKEK-KLHDSANQKSCFTCCIL 154


>SB_31024| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-09)
          Length = 397

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 213 QMRDQRREILHSCCGC 260
           +MR + +EIL  CCGC
Sbjct: 342 EMRRRTKEILSRCCGC 357


>SB_23919| Best HMM Match : Nanovirus_C8 (HMM E-Value=7.2)
          Length = 308

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 216 MRDQRREILHSCCGCRKPKIPDNAL 290
           MR++R  I+ +C  C  P  P N +
Sbjct: 1   MRERRENIVRACENCETPSSPKNTM 25


>SB_5092| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 226

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 13/50 (26%), Positives = 19/50 (38%)
 Frame = +3

Query: 198 HVPPLQMRDQRREILHSCCGCRKPKIPDNALECHXYIEDDNVXISTVLAR 347
           H PP      R  + HS    R   + D+   CH +I         ++AR
Sbjct: 99  HGPPCHTHISRHALSHSHITARTVTLADHGTHCHTHISRHAQSRQQIMAR 148


>SB_51664| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 183

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 128 LTSSADRAGKTRQHNITNAPNCFPCC 51
           LT+ A R  KTR  NI N  +   CC
Sbjct: 25  LTTPASRLSKTRGRNIRNCTSGTLCC 50


>SB_47050| Best HMM Match : FATC (HMM E-Value=6.2)
          Length = 85

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +1

Query: 142 VDKYSRKGYQP-WQEWSDHY 198
           V +   KG++P WQEW+ H+
Sbjct: 18  VSQVMYKGFKPYWQEWNGHF 37


>SB_59805| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 446

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +3

Query: 168 PAVARV-VGSLHVPPLQMRDQRR 233
           P VARV +GS    PLQM D RR
Sbjct: 147 PEVARVYIGSFWNQPLQMDDNRR 169


>SB_21427| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 49

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 139 CVDKYSRKGYQPWQEWSDHYTCHRY 213
           C D+ S  GY    E ++HYT  RY
Sbjct: 25  CRDQDSNLGYCGHNECTNHYTTRRY 49


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,820,632
Number of Sequences: 59808
Number of extensions: 202893
Number of successful extensions: 521
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 523129866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)