Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1195
(349 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48809-4|CAB76413.2| 332|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical pr... 27 2.8
U53335-1|AAA96169.1| 431|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical pr... 27 3.7
AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative pota... 27 3.7
Z81455-3|CAB03808.2| 890|Caenorhabditis elegans Hypothetical pr... 27 4.9
AL032623-19|CAA21519.2| 890|Caenorhabditis elegans Hypothetical... 27 4.9
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 27 4.9
L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p... 26 6.4
AF067216-4|AAC17526.1| 262|Caenorhabditis elegans Hypothetical ... 26 6.4
AF067216-3|AAC17525.1| 430|Caenorhabditis elegans Hypothetical ... 26 6.4
Z92786-10|CAB07212.3| 984|Caenorhabditis elegans Hypothetical p... 26 8.5
AL021473-3|CAA16306.3| 984|Caenorhabditis elegans Hypothetical ... 26 8.5
AL021471-2|CAA16296.2| 240|Caenorhabditis elegans Hypothetical ... 26 8.5
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 26 8.5
>Z48809-4|CAB76413.2| 332|Caenorhabditis elegans Hypothetical
protein T01E8.7 protein.
Length = 332
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 208 RYRCEIRDGKYFIAAVDVENQKYRITHWNATNTSKM 315
++ CE+ + ++F+ A+DV R+TH++ TS +
Sbjct: 171 QFPCEVDENRFFVLALDV-----RVTHYSVIITSSL 201
>Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical
protein F42A8.1 protein.
Length = 370
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 121 DVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGK 237
+ Y ACV R YQ + W+D + YRC DG+
Sbjct: 103 EFGYSACVGTDGRT-YQKGETWTDAKNTYYYRCR-DDGR 139
>U53335-1|AAA96169.1| 431|Caenorhabditis elegans Hypothetical
protein C55C3.4 protein.
Length = 431
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 121 DVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFIAAVD-VENQKYRITHWNA 297
+ ++ VDK G+ E +HY + +DG + VE QK+ + H +
Sbjct: 65 EADHKVYVDKI---GFPTIIELVNHYVSTKESFSTKDGTVKVVLKHAVERQKWELYHEDV 121
Query: 298 TNTSKMTMSEFPQCWR 345
T K+ F + W+
Sbjct: 122 ELTKKLGEGAFGEVWK 137
>Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical
protein C40C9.1 protein.
Length = 364
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 210 LQMRDQRREILHS-CCGCRKPKIP 278
L+ R RR I + CCGC KP+ P
Sbjct: 319 LRRRSTRRSIQDTVCCGCFKPRPP 342
>AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative
potassium channel subunitn2P20 protein.
Length = 364
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 210 LQMRDQRREILHS-CCGCRKPKIP 278
L+ R RR I + CCGC KP+ P
Sbjct: 319 LRRRSTRRSIQDTVCCGCFKPRPP 342
>Z81455-3|CAB03808.2| 890|Caenorhabditis elegans Hypothetical
protein B0399.2 protein.
Length = 890
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -3
Query: 341 QHCGNSDIV---IFDVXVAFQCVIRYFWFSTSTAAMKY 237
+HCG+ ++ + DV ++C+ YFW + KY
Sbjct: 838 EHCGSEMMLHELVGDVMELYECISTYFWNYIILKSRKY 875
>AL032623-19|CAA21519.2| 890|Caenorhabditis elegans Hypothetical
protein B0399.2 protein.
Length = 890
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -3
Query: 341 QHCGNSDIV---IFDVXVAFQCVIRYFWFSTSTAAMKY 237
+HCG+ ++ + DV ++C+ YFW + KY
Sbjct: 838 EHCGSEMMLHELVGDVMELYECISTYFWNYIILKSRKY 875
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 88 CCLVLPALSAEDVSYQACVDKYSRKGYQPWQEWSDHYTCHR 210
CC++ P ++ DV RKGY+ + + TC R
Sbjct: 295 CCILTPQINCTDVLTGCLTHLCDRKGYRQFMTNNCAKTCAR 335
>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
protein C14B9.8 protein.
Length = 1226
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 19 HLVTMAGVLRIQHGKQLGALVMLCC 93
H++ +A + + H K L +VM CC
Sbjct: 1158 HILHVANQIFVDHNKHLETIVMECC 1182
>AF067216-4|AAC17526.1| 262|Caenorhabditis elegans Hypothetical
protein C35E7.10b protein.
Length = 262
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 163 GYQPWQEWSDHYTCHRYRCEIRDGKY-FIAAVDVENQKYRITHWNATNTSKMTMSEFPQC 339
G+ E +HY + +DG + VE QK+ + H + T K+ F +
Sbjct: 76 GFPTIIELVNHYVSTKESFSTKDGTVKAVLKQAVERQKWELYHEDVELTKKLGEGAFGEV 135
Query: 340 WR 345
W+
Sbjct: 136 WK 137
>AF067216-3|AAC17525.1| 430|Caenorhabditis elegans Hypothetical
protein C35E7.10a protein.
Length = 430
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 163 GYQPWQEWSDHYTCHRYRCEIRDGKY-FIAAVDVENQKYRITHWNATNTSKMTMSEFPQC 339
G+ E +HY + +DG + VE QK+ + H + T K+ F +
Sbjct: 76 GFPTIIELVNHYVSTKESFSTKDGTVKAVLKQAVERQKWELYHEDVELTKKLGEGAFGEV 135
Query: 340 WR 345
W+
Sbjct: 136 WK 137
>Z92786-10|CAB07212.3| 984|Caenorhabditis elegans Hypothetical
protein Y20C6A.1 protein.
Length = 984
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 124 VSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFIAAVDVENQKYR 279
V Q + YS+K Y P + + Y +YR + ++G F+ + K R
Sbjct: 281 VKLQPNGELYSKKWYFPVGDGEEFYVLVKYRPKRKNGTQFVFRIQKLAMKIR 332
>AL021473-3|CAA16306.3| 984|Caenorhabditis elegans Hypothetical
protein Y20C6A.1 protein.
Length = 984
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 124 VSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFIAAVDVENQKYR 279
V Q + YS+K Y P + + Y +YR + ++G F+ + K R
Sbjct: 281 VKLQPNGELYSKKWYFPVGDGEEFYVLVKYRPKRKNGTQFVFRIQKLAMKIR 332
>AL021471-2|CAA16296.2| 240|Caenorhabditis elegans Hypothetical
protein Y17D7C.2 protein.
Length = 240
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 118 EDVSYQACVDKYSRKGYQPWQEWSDHYTCHRY 213
E Q CV K+ K Y+ + TCHRY
Sbjct: 122 ESPKQQKCVTKFLDKLYEISKSDETKLTCHRY 153
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 246 SCCGCRKPKIPDNALECHXYIEDDNVXISTVLA 344
SCCG RK I EC +D + ST+ A
Sbjct: 868 SCCGARKKVIVGRTFECSS-ADDSDAAPSTLCA 899
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,870,038
Number of Sequences: 27780
Number of extensions: 145851
Number of successful extensions: 465
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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