Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1195
(349 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20110.1 68417.m02943 vacuolar sorting receptor, putative sim... 31 0.16
At1g15780.1 68414.m01893 expressed protein 31 0.28
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 30 0.37
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 30 0.37
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 30 0.37
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 30 0.37
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 30 0.49
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim... 29 0.85
At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea... 29 1.1
At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim... 28 1.5
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 27 3.4
At4g25290.1 68417.m03637 deoxyribodipyrimidine photolyase family... 27 4.5
At2g30480.2 68415.m03713 expressed protein 27 4.5
At2g30480.1 68415.m03712 expressed protein 27 4.5
At1g20080.1 68414.m02513 C2 domain-containing protein contains I... 26 6.0
At5g13580.1 68418.m01570 ABC transporter family protein 26 7.9
At3g61950.2 68416.m06958 basic helix-loop-helix (bHLH) family pr... 26 7.9
At3g61950.1 68416.m06957 basic helix-loop-helix (bHLH) family pr... 26 7.9
At2g19650.1 68415.m02296 DC1 domain-containing protein contains ... 26 7.9
At1g07720.1 68414.m00832 beta-ketoacyl-CoA synthase family prote... 26 7.9
>At4g20110.1 68417.m02943 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222; identical to vacuolar sorting
receptor-like protein (GI:2827665) [Arabidopsis
thaliana]
Length = 625
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFI 246
Q CV + + + +PW W D+ T RC +++ KY I
Sbjct: 284 QLCVHRVANESSRPWVWW-DYVTDFHSRCSMKEKKYSI 320
>At1g15780.1 68414.m01893 expressed protein
Length = 1335
Score = 30.7 bits (66), Expect = 0.28
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 156 QERLPAVARVVGSLHVPPLQMRDQRREILHSCCGCRKPKIPDNALECHXYIEDDN 320
Q+RL A +V GSL +PP + DQ+R++ S P++P ++L+ E N
Sbjct: 538 QQRLQASGQVTGSL-LPPQNVVDQQRQLYQS--QRTLPEMPSSSLDSTAQTESAN 589
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K + + +PW W D+ T + RC +++ KY
Sbjct: 286 QLCVYKVANETGKPWVWW-DYVTDFQIRCPMKEKKY 320
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K + + +PW W D+ T + RC +++ KY
Sbjct: 286 QLCVYKVANETGKPWVWW-DYVTDFQIRCPMKEKKY 320
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K + + +PW W D+ T + RC +++ KY
Sbjct: 286 QLCVYKVANETGKPWVWW-DYVTDFQIRCPMKEKKY 320
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K + + +PW W D+ T + RC +++ KY
Sbjct: 286 QLCVYKVANETGKPWVWW-DYVTDFQIRCPMKEKKY 320
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K +++ + W W D+ T RC +++ KY
Sbjct: 283 QLCVHKVAKENNRSWVWW-DYVTDFHIRCSMKEKKY 317
>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
similar to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737218
Length = 625
Score = 29.1 bits (62), Expect = 0.85
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
QAC + + + +PW W D+ T RC +++ KY
Sbjct: 285 QACFFRVTNESGKPWLWW-DYVTDFAIRCPMKEEKY 319
>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
(GP:1737218) [Arabidopsis thaliana]
Length = 623
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
QACV + +PW W D+ T RC +++ KY
Sbjct: 281 QACVYRVMNDTGKPWVWW-DYVTDFAIRCPMKEKKY 315
>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 618
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K +++ W W D+ T RC +++ KY
Sbjct: 282 QLCVHKVAKEKNTSWVWW-DYVTDFNIRCSMKEKKY 316
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 252 SSYEVFPVSDLASVAVARVVIRPLLPRLVTFPGVF 148
S +++ P LA+ AVA P +P T PG+F
Sbjct: 189 SGFDMAPPDMLAATAVAAAGQVPSVPTTATIPGMF 223
>At4g25290.1 68417.m03637 deoxyribodipyrimidine photolyase family
protein / DNA photolyase family protein contains Pfam
domain, PF00875: deoxyribodipyrimidine photolyase
Length = 581
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 217 CEIRDG-KYFIAAVDVENQKYRITHWNATNTSKMTMSEFPQCWRD 348
CE+ D K + V + + RI W +++ PQ W +
Sbjct: 136 CEVLDAVKNKLEGVSLSGESPRIVAWRTPFYESQNLTDLPQSWEE 180
>At2g30480.2 68415.m03713 expressed protein
Length = 566
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 118 EDVSYQACVDKYSRKG--YQPWQEWSDHYTCHRYRCEIRDGKYFIAAVDVENQKYRITHW 291
+D Y++ + +++ G Q Q +SDH H+ + R+ YF D N ++ W
Sbjct: 168 DDSLYRSPIGIHAKDGGRKQKLQTFSDHL--HKQYSDSRN--YFCDVADFNNSRFSDDEW 223
Query: 292 NA 297
NA
Sbjct: 224 NA 225
>At2g30480.1 68415.m03712 expressed protein
Length = 621
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 118 EDVSYQACVDKYSRKG--YQPWQEWSDHYTCHRYRCEIRDGKYFIAAVDVENQKYRITHW 291
+D Y++ + +++ G Q Q +SDH H+ + R+ YF D N ++ W
Sbjct: 168 DDSLYRSPIGIHAKDGGRKQKLQTFSDHL--HKQYSDSRN--YFCDVADFNNSRFSDDEW 223
Query: 292 NA 297
NA
Sbjct: 224 NA 225
>At1g20080.1 68414.m02513 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 535
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 231 VSDLASVAVARVVIRPLLPRLVTFPGVFI 145
V DL A R+ ++PL+P F +F+
Sbjct: 167 VIDLQVYATPRITLKPLVPSFPCFANIFV 195
>At5g13580.1 68418.m01570 ABC transporter family protein
Length = 727
Score = 25.8 bits (54), Expect = 7.9
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 306 CIXGIPVRYPVFLVFDIHSSYEVFPVSDL----ASVAVARVVIRPLLPRLVTFPGVFIDA 139
C +PV +F ++Y + S + VA+ ++I L +TF GV +D
Sbjct: 487 CADALPVFLQERFIFMRETAYNAYRRSSYVLSHSLVALPSLIILSLAFAAITFWGVGLDG 546
Query: 138 GLIANVF 118
GL+ +F
Sbjct: 547 GLMGFLF 553
>At3g61950.2 68416.m06958 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 307
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 208 RYRCEIRDGKYFIAAVDVENQKYRITHWNATNTSKMTMS 324
+ +CE + G+ + +E K + H N T +S ++S
Sbjct: 237 KVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVS 275
>At3g61950.1 68416.m06957 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 358
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 208 RYRCEIRDGKYFIAAVDVENQKYRITHWNATNTSKMTMS 324
+ +CE + G+ + +E K + H N T +S ++S
Sbjct: 288 KVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVS 326
>At2g19650.1 68415.m02296 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 682
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 195 LHVPPLQMRDQRREILHSCCGC 260
LH PLQ+ + E L C GC
Sbjct: 151 LHEHPLQLSHEAHETLRDCKGC 172
>At1g07720.1 68414.m00832 beta-ketoacyl-CoA synthase family protein
similar to GB:AAC99312 from [Arabidopsis thaliana]
(Plant J. (1999) In press)
Length = 478
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 73 ALVMLCCLVLPALSAEDVSYQACVDKYSRKGY 168
A+ L CLV A D S+ ACV K G+
Sbjct: 236 AMFKLRCLVRTHHGARDDSFNACVQKEDELGH 267
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,462,342
Number of Sequences: 28952
Number of extensions: 136055
Number of successful extensions: 414
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 429398688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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