Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1193
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0220 + 28482589-28483752 73 3e-13
01_06_0049 - 25953811-25954131,25954223-25954903 69 3e-12
03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669 66 3e-11
08_01_0395 - 3502750-3503033,3504844-3505663 46 4e-05
08_02_1097 + 24284494-24284496,24284946-24285407,24285476-242864... 43 3e-04
07_01_0287 - 2094333-2094542,2094719-2095999 42 6e-04
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 40 0.002
04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142... 40 0.002
02_01_0703 + 5251901-5251950,5252783-5253554 39 0.003
04_01_0021 + 311914-312399,314218-314310,314391-314672,314754-31... 34 0.094
01_01_0521 - 3826257-3826616,3826758-3826918,3826992-3827049,382... 34 0.094
07_03_0944 + 22787933-22789906 34 0.12
02_02_0568 + 11577804-11578676,11578956-11579042,11579043-11579141 34 0.12
09_03_0048 + 11880848-11880952,11881030-11881312,11882667-118827... 32 0.50
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043... 31 0.67
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388... 31 1.2
06_03_1309 + 29223197-29223240,29223358-29223592,29223695-292237... 30 2.0
05_01_0212 + 1601861-1603600 30 2.0
07_03_1620 - 28180020-28180862 29 3.5
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009 29 3.5
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 29 3.5
10_05_0067 + 8756044-8756075,8756180-8756357,8756800-8757471 29 4.7
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 29 4.7
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 29 4.7
06_03_0512 + 21633594-21633890 28 6.2
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 28 8.2
05_06_0141 - 25964706-25965473 28 8.2
>05_07_0220 + 28482589-28483752
Length = 387
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +1
Query: 256 CQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
CQFAHGV ELR + RHP+YKT++CR + G CPYG RCHF H+ A R
Sbjct: 333 CQFAHGVAELRPVIRHPRYKTQVCRMVLAGGVCPYGHRCHFRHSITPADR 382
Score = 42.3 bits (95), Expect = 4e-04
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEAR 402
+KTELC + G CPYG +C F H E R
Sbjct: 313 FKTELCNKWEETGACPYGDQCQFAHGVAELR 343
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 197 YKTELCRPFEEAGVCKYGD 253
+KTELC +EE G C YGD
Sbjct: 313 FKTELCNKWEETGACPYGD 331
>01_06_0049 - 25953811-25954131,25954223-25954903
Length = 333
Score = 69.3 bits (162), Expect = 3e-12
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = +1
Query: 256 CQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
CQFAHGV ELR + RHP+YKT +CR + CPYG RCHF H+ A R
Sbjct: 279 CQFAHGVTELRPVIRHPRYKTAVCRMVLAGDVCPYGHRCHFRHSLTPAER 328
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEAR 402
+KTELC + G CPYG +C F H E R
Sbjct: 259 FKTELCNKWEETGDCPYGDQCQFAHGVTELR 289
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 197 YKTELCRPFEEAGVCKYGD 253
+KTELC +EE G C YGD
Sbjct: 259 FKTELCNKWEETGDCPYGD 277
>03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669
Length = 457
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1
Query: 256 CQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEARRRE 411
C+FAHG++ELR + RHP+YKT C+ F + CPYG RCHF H+ A E
Sbjct: 402 CRFAHGLQELRPVIRHPRYKTLPCQMFAAASGCPYGHRCHFRHSPLRAAAAE 453
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1
Query: 313 KTELCRTFHSVGFCPYGPRCHFVHNAEEAR 402
KTELC + G CPYG RC F H +E R
Sbjct: 384 KTELCNKWER-GACPYGARCRFAHGLQELR 412
>08_01_0395 - 3502750-3503033,3504844-3505663
Length = 367
Score = 45.6 bits (103), Expect = 4e-05
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 292 LQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
+Q+ +KT +C + G+CP+G +CHF H A E +
Sbjct: 240 MQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 277
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
+KT+LC F + G CPY C+F H EE R+
Sbjct: 88 FKTKLCCKFRA-GTCPYVTNCNFAHGMEELRK 118
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARRRE 411
YK C+ F++ CPYG C F+H+ E+++ RE
Sbjct: 170 YKGRHCKKFYTDEGCPYGDACTFLHD-EQSKARE 202
>08_02_1097 +
24284494-24284496,24284946-24285407,24285476-24286450,
24286566-24286655,24286760-24287021,24287447-24287472
Length = 605
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 256 CQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHF 378
C++AH ELR + PKY+TE CR + + C YG +C +
Sbjct: 540 CEYAHSQDELRVIDARPKYRTEPCRYWLAGKGCWYGDKCRY 580
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 271 GVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEAR 402
G + + Q+ + KT +C + G C G C + H+ +E R
Sbjct: 507 GAIQAKGKQKMREPKTVMCPDWCRTGHCSSGDGCEYAHSQDELR 550
>07_01_0287 - 2094333-2094542,2094719-2095999
Length = 496
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 307 KYKTELCRTFHSVGFCPYGPRCHFVHNAEEARRRE 411
KYKT+LC+TF S G C + C F H E ++E
Sbjct: 439 KYKTKLCKTFTSGGLCLFAANCRFAHGEVELGKKE 473
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 229 SGGL*IWG*-CQFAHGVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHN 387
SGGL ++ C+FAHG EL K E C F S CP G C F H+
Sbjct: 450 SGGLCLFAANCRFAHGEVELG--------KKEPCWYFFSGQTCPRGDTCGFRHS 495
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
+KT+LC F+ G C +G RCHF H E R+
Sbjct: 574 FKTKLCENFNK-GSCTFGDRCHFAHGESELRK 604
Score = 33.1 bits (72), Expect = 0.22
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 313 KTELCRTFHSVGFCPYGPRCHFVHNAEE 396
KT +C +++ C +G +CHF H E
Sbjct: 414 KTRMCNKYNTAEGCKWGSKCHFAHGERE 441
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Frame = +1
Query: 304 PKYKTELCRTFH-----SVGFCPYGPRCHFVHN 387
PKYK R FH S CP+G CHF+HN
Sbjct: 343 PKYKP---RVFHRTSDGSTSGCPFGSSCHFLHN 372
>04_04_1500 +
34010819-34011016,34013267-34013308,34014195-34014204,
34014526-34014586,34014621-34014678,34015266-34015412,
34015643-34016205,34018942-34019728
Length = 621
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
YKT+LC F G C +G RCHF H E R+
Sbjct: 588 YKTKLCENFVK-GTCTFGDRCHFAHGENEQRK 618
Score = 33.1 bits (72), Expect = 0.22
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 313 KTELCRTFHSVGFCPYGPRCHFVHNAEE 396
KT +C +++ C +G +CHF H E
Sbjct: 417 KTRMCTKYNTAEGCKFGDKCHFAHGERE 444
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEARR 405
+KT+LC F + G C +G RCHF H E R+
Sbjct: 239 FKTKLCENF-TKGSCTFGDRCHFAHGENELRK 269
Score = 35.9 bits (79), Expect = 0.031
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 304 PKYKTELCRTFHSVGFCPYGPRCHFVHNAEE 396
P KT LC +++ C +G +CHF H E
Sbjct: 71 PTVKTRLCNKYNTAEGCKWGDKCHFAHGERE 101
>04_01_0021 +
311914-312399,314218-314310,314391-314672,314754-314826,
315273-315405,315476-315629,315763-315843,316174-316296,
316629-316787,316862-316996,317159-317254,317416-317910,
318651-318722,319496-319537
Length = 807
Score = 34.3 bits (75), Expect = 0.094
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = +1
Query: 298 RHPKYKTELCRTFH-----SVGFCPYGPRCHFVHNAEEARRR 408
+HP +KT LC F S C +G C + H+ EE R R
Sbjct: 48 QHPMWKTSLCSFFRRRAASSADGCSHGDSCRYAHSEEELRPR 89
>01_01_0521 -
3826257-3826616,3826758-3826918,3826992-3827049,
3827426-3827497,3827582-3827639,3828231-3828347,
3828630-3828782,3829182-3829346,3829814-3830132,
3830276-3830780
Length = 655
Score = 34.3 bits (75), Expect = 0.094
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEEAR 402
YKT +C TF + G C + C F H EE R
Sbjct: 57 YKTRVCETFVTSGRCMFEDGCTFAHGDEELR 87
>07_03_0944 + 22787933-22789906
Length = 657
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +1
Query: 247 WG*CQFAHGVRELRNL--QRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEA 399
W C F H R ++HP Y C F G CP G C F H E+
Sbjct: 253 WTECPFVHPGENARRRDPRKHP-YTAVPCPNFRRPGGCPSGDSCEFSHGVFES 304
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 214 PTV*RSGGL*IWG*CQFAHGVRELRNLQRHP-KYKTELCRTFHSVGFCPYGPRCHFVHNA 390
P R GG C+F+HGV E HP +Y+T LC+ G C F H+
Sbjct: 281 PNFRRPGGCPSGDSCEFSHGVFE---SWLHPSQYRTRLCKE----GAACARRICFFAHDE 333
Query: 391 EEAR 402
+E R
Sbjct: 334 DELR 337
>02_02_0568 + 11577804-11578676,11578956-11579042,11579043-11579141
Length = 352
Score = 33.9 bits (74), Expect = 0.12
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHN 387
Y+ ++C+ + G+C YG C F+H+
Sbjct: 188 YQPDICKDYKETGYCGYGDSCKFMHD 213
Score = 31.1 bits (67), Expect = 0.88
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 197 YKTELCRPFEEAGVCKYGDNANLLTASANY 286
Y+ ++C+ ++E G C YGD+ + +Y
Sbjct: 188 YQPDICKDYKETGYCGYGDSCKFMHDRGDY 217
>09_03_0048 +
11880848-11880952,11881030-11881312,11882667-11882770,
11883998-11884416,11884698-11884998,11885136-11885232,
11885719-11885864,11885975-11886103
Length = 527
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 295 QRHPKYK-TELCRTFHSVGFCPYGPRCHFVHNAEEAR 402
QRH + LC F S G CP G +C++ H+ EEAR
Sbjct: 227 QRHGEAGGNRLCFKFTSSGSCPRGSKCNYRHD-EEAR 262
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 310 YKTELCRTFHSVGFCPYGPRCHFVHNAEE 396
Y +C F + G C GP C F H+ +
Sbjct: 265 YNRNVCFDFLNKGKCEKGPECRFAHSLSD 293
>10_07_0063 -
12502305-12503361,12503567-12503668,12504251-12504378,
12504653-12504764,12504876-12504927,12505260-12505517,
12505943-12506079,12506296-12506606
Length = 718
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 286 RNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHN 387
+N QR +K C + G+CPYG C F+H+
Sbjct: 685 QNPQRFRPWKP--CFIYQQQGWCPYGENCKFMHD 716
>02_04_0624 +
24538095-24538183,24538429-24538612,24538725-24538886,
24538988-24539225,24539301-24539370,24539439-24539530,
24539799-24539836,24540018-24540039,24540462-24540618,
24540702-24540753,24542144-24542207,24542279-24542362,
24543418-24543543,24543622-24543818,24543903-24544091,
24544186-24544434,24544507-24544556,24544977-24545059,
24545164-24545449,24545751-24545794,24545878-24546626
Length = 1074
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +3
Query: 174 LRHQPQVATRPSSADRLKKRGFVN-MGIMPICSRRPRTTQSSASS*IQDGAVSHFPFGWL 350
L + P+ A + R+K + M I P+ + R ++ + I+D F F W+
Sbjct: 176 LLNDPRGAALEAIVSRIKMLSRLGTMKIAPLANVRFIAVSATIPN-IEDIDYLRFGFAWI 234
Query: 351 LSLWTALPFRA*RRGSKTQRTI-VARRFIGIALIGRIYGVVYERRVAIA 494
+ W A+P +R + R + + + G+ L+ ++ +R A A
Sbjct: 235 SAEWLAVPSEGIKRFGEEMRPVKLTTKVFGMVLVSHHIANIWPKRYAPA 283
>06_03_1309 +
29223197-29223240,29223358-29223592,29223695-29223783,
29223870-29223968,29224065-29224158,29224297-29224514,
29224861-29224967,29225298-29225472,29225596-29225743,
29226548-29226596,29228016-29228162,29229990-29229996,
29230417-29230482,29230773-29231991,29232073-29233149,
29233226-29233355,29233519-29233617,29233817-29233878,
29234429-29234533
Length = 1389
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 313 KTELCRTFHSVGFCPYGPRCHFVHNAEEARRRE 411
+ E+CR F G C YG +C ++H + ++++
Sbjct: 4 RQEICRNFQR-GSCKYGAQCRYLHASPHQQQQQ 35
>05_01_0212 + 1601861-1603600
Length = 579
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +1
Query: 247 WG*CQFAH-GVRELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEE 396
W C F H G R R Y C F G C G C + H E
Sbjct: 209 WTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFE 259
>07_03_1620 - 28180020-28180862
Length = 280
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 256 CQFAHGVRELRNLQRHP-KYKTELCRTFHSVGF-CPYGPRCHFVHNAEEAR 402
C++AHGV E L HP +++T +C S G CP C F H+A E R
Sbjct: 116 CRYAHGVFE---LWLHPSRFRTRMC----SAGTRCP-RRICFFAHSAAELR 158
>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
Length = 768
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 141 AVSNAPPVNRLLRHQPQVATRPSSADRLKKRGFVNMGIMPICSRRPRT 284
A+ +PP LL +P R ++DRL +G+ N G P+C R T
Sbjct: 656 AIIASPPRLTLLCLRP--VNRVWTSDRLATKGWQNNGRCPLCRREDET 701
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 277 RELRNLQRHPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEAR 402
REL + P + E+C F G C G CHF H++ R
Sbjct: 970 RELVHGYVQPALENEMC-VFFLNGSCNRGDTCHFSHSSRAPR 1010
>10_05_0067 + 8756044-8756075,8756180-8756357,8756800-8757471
Length = 293
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 210 SADRLKKRGFVNMGIMPICSRRPRTTQSSA 299
+ DRL+KRG+ N + P+C R TQ SA
Sbjct: 250 TVDRLQKRGWQNQQLCPLC----RVTQESA 275
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +1
Query: 256 CQFAHGVRELRN---LQRHPKYKTELCRTFHSVGFCPYGPRCHFVH 384
C+F E R +H + C + +GFCP GP C + H
Sbjct: 92 CRFFRDFGECREPDCAYKHSYDDVKECNMY-KMGFCPNGPNCRYKH 136
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 325 CRTFHSVGFCPYGPRCHFVHNAEEA 399
C+ + G C +GP C F H E+A
Sbjct: 131 CQYYLKTGTCKFGPTCKFHHPREKA 155
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 319 ELCRTFHSVGFCPYGPRCHFVH 384
ELC+ + G C +G C F H
Sbjct: 382 ELCKFYSRYGICKFGANCKFDH 403
>06_03_0512 + 21633594-21633890
Length = 98
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 482 PSLIYDAIDPPDESDANEPPGDDGSLRLASSALCTKWQR 366
PS+ Y + PP DA EPP +R S A W+R
Sbjct: 55 PSITYRMMPPP-LPDALEPPTTTTMMRRTSRATAMVWER 92
>06_03_0867 + 25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 301 HPKYKTELCRTFHSVGFCPYGPRCHFVHNAEEARRR 408
H K+ + +C F + G CP G RC H + + +
Sbjct: 1932 HKKH-SYVCPVFEATGECPQGSRCKLHHPKSKVKSK 1966
>05_06_0141 - 25964706-25965473
Length = 255
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Frame = +1
Query: 247 WG*CQFAH-GVRELRNLQRHPKYKTELCRTFHSV--GFCPYGPRCHFVHNAEE 396
W C +AH G R R Y E C F CP G C F H E
Sbjct: 77 WTACPYAHPGEAARRRDPRRVAYTGEPCPDFRRRPGAACPRGSTCPFAHGTFE 129
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,155,360
Number of Sequences: 37544
Number of extensions: 367471
Number of successful extensions: 1322
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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