Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1191
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 343 HNPLIMPTLKNIPRGINESKKEGIVTTLFSYANEQK 236
           HNPL  P  + +    +E +++ + TTL   A+  +
Sbjct: 103 HNPLTPPNSEPLVSPKSEKEEKDMETTLTPCASPNR 138


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 336 GLCFLIRKFNSEYGDSKSFL*NILR 410
           GLC   RKF + Y  +   L  +LR
Sbjct: 540 GLCNFYRKFCARYSAATQDLNKLLR 564


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 73   LVSDYVFFFCFSLKLLISAHIY 8
            L    +FFFC + + +I+A ++
Sbjct: 974  LAPSSLFFFCMAAEFIIAALLH 995


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 73   LVSDYVFFFCFSLKLLISAHIY 8
            L    +FFFC + + +I+A ++
Sbjct: 974  LAPSSLFFFCMAAEFIIAALLH 995


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 474 DDDLVPINNFLRSSLVYL 421
           +DD+VP NN L+  ++ L
Sbjct: 159 EDDVVPGNNGLKDQILAL 176


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 474 DDDLVPINNFLRSSLVYL 421
           +DD+VP NN L+  ++ L
Sbjct: 159 EDDVVPGNNGLKDQILAL 176


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 474 DDDLVPINNFLRSSLVYL 421
           +DD+VP NN L+  ++ L
Sbjct: 159 EDDVVPGNNGLKDQILAL 176


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 474 DDDLVPINNFLRSSLVYL 421
           +DD+VP NN L+  ++ L
Sbjct: 159 EDDVVPGNNGLKDQILAL 176


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 474 DDDLVPINNFLRSSLVYL 421
           +DD+VP NN L+  ++ L
Sbjct: 159 EDDVVPGNNGLKDQILAL 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,208
Number of Sequences: 336
Number of extensions: 3328
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)