Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1187
(449 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 119 1e-27
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 118 2e-27
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 117 5e-27
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 3e-21
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 76 1e-14
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 68 4e-12
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 4e-08
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 54 5e-08
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 54 5e-08
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 54 5e-08
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 54 5e-08
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 9e-07
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 44 4e-05
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.007
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.25
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 32 0.25
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 29 2.3
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29) 29 2.3
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 29 2.3
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_48969| Best HMM Match : DUF1068 (HMM E-Value=5.3) 28 3.1
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 28 3.1
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 28 3.1
SB_6317| Best HMM Match : RVT_2 (HMM E-Value=2.5e-14) 28 4.1
SB_43674| Best HMM Match : RVT_2 (HMM E-Value=2.5e-14) 28 4.1
SB_57594| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 27 9.5
SB_15393| Best HMM Match : Peptidase_M16_C (HMM E-Value=6.6e-05) 27 9.5
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 119 bits (286), Expect = 1e-27
Identities = 67/112 (59%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGAS-T 299
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQL + G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 300 SREL*WWTLSLEPWT-PSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP T SV G G+ VFGQS A NNWAKGHYTEG
Sbjct: 61 PRAI---LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 97.9 bits (233), Expect = 3e-21
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
RINVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNF
Sbjct: 46 RINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNF 90
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 118 bits (285), Expect = 2e-27
Identities = 67/112 (59%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGAS-T 299
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQL + G
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 273
Query: 300 SREL*WWTLSLEPWT-PSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP T SV G G+ VFGQS A NNWAKGHYTEG
Sbjct: 274 PRAV---LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 322
Score = 98.3 bits (234), Expect = 3e-21
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
RINVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNF
Sbjct: 259 RINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF 303
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 117 bits (281), Expect = 5e-27
Identities = 66/112 (58%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGAS-T 299
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQL + G
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 300 SREL*WWTLSLEPWT-PSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP T SV G G+ VFGQS A NNWAKGHYTEG
Sbjct: 61 PRSV---LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 96.7 bits (230), Expect = 8e-21
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
RINVYYNEA+GGKYVPR+V++DLEPGTMDSVRSGPFGQIFRPDNF
Sbjct: 46 RINVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNF 90
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 97.9 bits (233), Expect = 3e-21
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
RINVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNF
Sbjct: 46 RINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNF 90
Score = 90.6 bits (215), Expect = 5e-19
Identities = 40/44 (90%), Positives = 40/44 (90%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQL
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL 44
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 76.2 bits (179), Expect = 1e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 290 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNF
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF 35
Score = 43.6 bits (98), Expect = 8e-05
Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 324 LSLEPWT-PSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ LEP T SV G G+ VFGQS A NNWAKGHYTEG
Sbjct: 11 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 54
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 67.7 bits (158), Expect = 4e-12
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +2
Query: 284 SGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
+GG+YVPR+++VDLEPGTMD+VR GP G +FRPDNF
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNF 46
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 324 LSLEPWTPSVP--GRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ LEP T G LG V QS A NNWAKGHY+EG
Sbjct: 22 VDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEG 65
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 54.4 bits (125), Expect = 4e-08
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRAV VDLEP +D +R+G + Q+F P+
Sbjct: 468 NTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPE 508
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRAV DLEP +D VR+G + Q+F P+
Sbjct: 35 NTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPE 75
Score = 43.6 bits (98), Expect = 8e-05
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGASTS 302
RE V I GQ G Q+G WE+ EHGI G D + + S +T GA
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 303 REL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ + LEP G + + G+ A NN+A+GHYT G
Sbjct: 480 VPRAVF-VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 529
Score = 29.5 bits (63), Expect = 1.3
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +3
Query: 168 IGAKFWEVISDEHGIDATGAYSGDSDLQL-NASMSTITKLQGASTSREL*WWTLSLEPWT 344
+G WE+ EHGI G D + + S +T GA + LEP
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFC-DLEPTV 59
Query: 345 PSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
G + + G+ A NN+A+GHYT G
Sbjct: 60 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 96
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 54.0 bits (124), Expect = 5e-08
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+
Sbjct: 49 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 89
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGASTS 302
RE + I GQ G QIG WE+ EHGI G D + + S +T GA
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 303 REL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ + LEP G + + G+ A NN+A+GHYT G
Sbjct: 61 VPRAVF-VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 110
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 54.0 bits (124), Expect = 5e-08
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 90
Score = 54.0 bits (124), Expect = 5e-08
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+
Sbjct: 483 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 523
Score = 47.6 bits (108), Expect = 5e-06
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGAST 299
MRE + I GQ G QIG WE+ EHGI G D + + S +T GA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 300 SREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ + LEP G + V G+ A NN+A+GHYT G
Sbjct: 61 HVPRAVF-VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVG 111
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGASTS 302
RE + I GQ G QIG WE+ EHGI G D + + S +T GA
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 303 REL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ + LEP G + + G+ A NN+A+GHYT G
Sbjct: 495 VPRAVF-VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 544
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 54.0 bits (124), Expect = 5e-08
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+
Sbjct: 114 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 154
Score = 54.0 bits (124), Expect = 5e-08
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+
Sbjct: 635 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 675
Score = 45.6 bits (103), Expect = 2e-05
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGAST 299
+RE + I GQ G QIG WE+ EHGI G D + + S +T GA
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 300 SREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ + LEP G + + G+ A NN+A+GHYT G
Sbjct: 646 HVPRAVF-VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 696
Score = 45.2 bits (102), Expect = 3e-05
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = +3
Query: 120 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGAS 296
+ RE + + GQ G QIG WE+ EHGI G D + + S +T GA
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 123
Query: 297 TSREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ + LEP G + + G+ A NN+A+GHYT G
Sbjct: 124 KHVPRAVF-VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 175
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSV 349
N +++E GK+VPRAV VDLEP + +
Sbjct: 562 NTFFSETGAGKHVPRAVFVDLEPTVRECI 590
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 54.0 bits (124), Expect = 5e-08
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 90
Score = 45.6 bits (103), Expect = 2e-05
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGAST 299
MRE + I GQ G Q+G WE+ EHGI G D + + S +T GA
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 300 SREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ + LEP G + + G+ A NN+A+GHYT G
Sbjct: 61 HVPRAVF-VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 111
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 52.8 bits (121), Expect = 1e-07
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N ++ E GK+VPRAV VDLEP +D VR+G + Q+F P+
Sbjct: 421 NTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPE 461
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRAV DLEP +D VR+G + Q+F P+
Sbjct: 854 NTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPE 894
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGASTS 302
RE + I GQ G QIG WE+ EHGI G D + + + +T GA
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 303 REL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ + LEP G + + G+ A NN+A+GHYT G
Sbjct: 433 VPRAVF-VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 482
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGASTS 302
RE + + GQ G Q+G WE+ EHGI G D + + S +T GA
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 303 REL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ LEP G + + G+ A NN+A+GHYT G
Sbjct: 866 VPRAVFA-DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 915
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N ++ E GK+VPRAV VDLEP +D +R+G + Q+F P+
Sbjct: 15 NTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPE 55
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 399 GQSXAVNNWAKGHYTEG 449
G+ A NN+A+GHYT G
Sbjct: 60 GKEDAANNYARGHYTVG 76
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRAV DLEP +D VR+G + Q+F P+
Sbjct: 50 NTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPE 90
Score = 43.6 bits (98), Expect = 8e-05
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGAST 299
MRE + + GQ G Q+G WE+ EHGI G D + + S +T G+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 300 SREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ LEP G + + G+ A NN+A+GHYT G
Sbjct: 61 HVPRAVF-CDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVG 111
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 50.0 bits (114), Expect = 9e-07
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +2
Query: 275 NEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
+EA+ GKYVPRAV+VDLEP +D VR+G + ++ P+
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPE 1001
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 393 VFGQSXAVNNWAKGHYTEG 449
+ G+ A NN+A+GHYT G
Sbjct: 1004 ISGKEDAANNYARGHYTIG 1022
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 44.4 bits (100), Expect = 4e-05
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD-SDLQLNASMSTITKLQGAST 299
MRE + I GQ G QIG WE+ EHGI G D + + S +T GA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 300 SREL*WWTLSLEPWTPSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ + LEP ++ P +L + G+ A NN+A+GHYT G
Sbjct: 61 HVPRAVF-VDLEPTVVALSPEQL---------ITGKEDAANNYARGHYTIG 101
Score = 36.7 bits (81), Expect = 0.009
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEP 331
N +++E GK+VPRAV VDLEP
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEP 72
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVR 352
N +++E GGK+VPRAV VDLEP + ++
Sbjct: 50 NTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
MRE + + GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSD 234
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 31.9 bits (69), Expect = 0.25
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 132 IVHIQAGQCGNQIGAKFWEVISDE 203
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 31.9 bits (69), Expect = 0.25
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 402 QSXAVNNWAKGHYTEG 449
Q+ A NNWAKG YTEG
Sbjct: 2 QNSAANNWAKGFYTEG 17
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 30.7 bits (66), Expect = 0.58
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 180 FWEVISDEHGIDATG 224
FWEVI++EHGID G
Sbjct: 1 FWEVIAEEHGIDPDG 15
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 393 VFGQSXAVNNWAKGHYTEG 449
+ G+ A NN+A+GHYT G
Sbjct: 18 ITGKEDAANNYARGHYTVG 36
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 393 VFGQSXAVNNWAKGHYTEG 449
+ G+ A NN+A+GHYT G
Sbjct: 30 ITGKEDAANNYARGHYTVG 48
>SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29)
Length = 190
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 201 EHGIDATGAYSGDSDLQLNASMSTITK 281
+HG+ TG + GDSD +L+A++ +K
Sbjct: 137 DHGMTRTGDHGGDSDDELDAALFVYSK 163
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 393 VFGQSXAVNNWAKGHYTEG 449
+ G+ A NN+A+GHYT G
Sbjct: 18 ITGKEDAANNYARGHYTVG 36
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 393 VFGQSXAVNNWAKGHYTEG 449
+ G+ A NN+A+GHYT G
Sbjct: 18 ITGKEDAANNYARGHYTVG 36
>SB_48969| Best HMM Match : DUF1068 (HMM E-Value=5.3)
Length = 340
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 327 SLEPWTPSVPGRLGKSSDRTTSVFGQSXAVNNWAKGHYTE 446
S P TPS P + ++V + ++ W K HY E
Sbjct: 32 SQAPGTPSAPAVTEYNPQERSAVVVDNYSIAKWVKSHYVE 71
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 28.3 bits (60), Expect = 3.1
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 305 RAVMVDLEPGTMDSVRSGPFGQIF 376
RAV++D+E G ++++ GP +F
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVF 99
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 399 GQSXAVNNWAKGHYTEG 449
G+ A NN+A+GHYT G
Sbjct: 20 GKEDAANNYARGHYTVG 36
>SB_6317| Best HMM Match : RVT_2 (HMM E-Value=2.5e-14)
Length = 813
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 429 SPSYSPPQTVRRXKLSGRKICPNGPER 349
SP SP ++V ++ RK CPN P +
Sbjct: 118 SPVKSPDESVTENGINHRKSCPNSPHQ 144
>SB_43674| Best HMM Match : RVT_2 (HMM E-Value=2.5e-14)
Length = 813
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 429 SPSYSPPQTVRRXKLSGRKICPNGPER 349
SP SP ++V ++ RK CPN P +
Sbjct: 118 SPVKSPDESVTENGINHRKSCPNSPHQ 144
>SB_57594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1386
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 444 LCNVLSPSYSPPQTVRRXK 388
L +VL P YSPP T RR K
Sbjct: 1319 LLSVLKPVYSPPGTSRRSK 1337
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 117 AIMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYS 233
A +RE++ +Q G N +G +W + DA S
Sbjct: 25 ATVREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKS 63
>SB_15393| Best HMM Match : Peptidase_M16_C (HMM E-Value=6.6e-05)
Length = 683
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 177 KFW-EVISDEHGIDATGAYSGDSDLQLNASMSTIT 278
K W E+++ ++ D YSG DLQ ++++I+
Sbjct: 528 KHWGEILTRQYNFDRACTYSGRGDLQERTTLASIS 562
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,204,439
Number of Sequences: 59808
Number of extensions: 306655
Number of successful extensions: 814
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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