Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1187
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 123 5e-29
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 115 1e-26
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 115 1e-26
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 114 2e-26
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 110 5e-25
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 109 1e-24
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 93 1e-19
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 93 1e-19
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 54 5e-08
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 52 1e-07
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 52 1e-07
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 52 1e-07
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 52 2e-07
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 51 3e-07
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 51 3e-07
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 51 4e-07
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 51 4e-07
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 50 6e-07
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 50 6e-07
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 50 6e-07
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 50 6e-07
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 50 1e-06
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 50 1e-06
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 43 1e-04
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 43 1e-04
AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical ... 29 2.1
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 28 2.7
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 28 3.6
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 28 3.6
U29244-5|AAC71090.1| 378|Caenorhabditis elegans Hypothetical pr... 27 4.8
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 123 bits (297), Expect = 5e-29
Identities = 68/111 (61%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGASTS 302
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQL + G
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 303 REL*WWTLSLEPWT-PSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ LEP T SV G G+ VFGQS A NNWAKGHYTEG
Sbjct: 61 PRA--CLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
RINVYYNEASGGKYVPRA +VDLEPGTMDSVR+GPFGQ+FRPDNF
Sbjct: 46 RINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNF 90
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 115 bits (277), Expect = 1e-26
Identities = 65/111 (58%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGASTS 302
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQL + + S
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 303 REL*WWTLSLEPWT-PSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ LEP T SV G G+ VFGQS A NNWAKGHYTEG
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEG 109
Score = 91.1 bits (216), Expect = 3e-19
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
RINVYYNEA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+
Sbjct: 46 RINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNY 90
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 115 bits (277), Expect = 1e-26
Identities = 65/111 (58%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGASTS 302
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQL + + S
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 303 REL*WWTLSLEPWT-PSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ LEP T SV G G+ VFGQS A NNWAKGHYTEG
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEG 109
Score = 91.1 bits (216), Expect = 3e-19
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
RINVYYNEA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+
Sbjct: 46 RINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNY 90
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 114 bits (275), Expect = 2e-26
Identities = 64/112 (57%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGAS-T 299
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQL + G
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 300 SREL*WWTLSLEPWT-PSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP T SV G G+ VFGQS A NNWAKGHYTEG
Sbjct: 61 PRAV---LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 97.5 bits (232), Expect = 4e-21
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
RINVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNF
Sbjct: 46 RINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNF 90
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 110 bits (264), Expect = 5e-25
Identities = 62/112 (55%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKL-QGAST 299
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQL + G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 300 SREL*WWTLSLEPWT-PSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP T SV G G+ VFGQS A NNWAKGHYTEG
Sbjct: 61 PRAV---LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 93.1 bits (221), Expect = 8e-20
Identities = 40/45 (88%), Positives = 44/45 (97%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
RI+VYYNEA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNF
Sbjct: 46 RIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNF 90
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 109 bits (261), Expect = 1e-24
Identities = 61/112 (54%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKL-QGAST 299
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQL + G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 300 SREL*WWTLSLEPWT-PSV-PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP T SV G G+ VFGQS A NNWAKGHYTEG
Sbjct: 61 PRAV---LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 93.1 bits (221), Expect = 8e-20
Identities = 40/45 (88%), Positives = 44/45 (97%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNF 391
RI+VYYNEA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNF
Sbjct: 46 RIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNF 90
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 92.7 bits (220), Expect = 1e-19
Identities = 45/109 (41%), Positives = 62/109 (56%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGASTS 302
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QL S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 303 REL*WWTLSLEPWTPSVPGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
L E + GK D +V G+S A NNW++G+Y +G
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQG 109
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 92.7 bits (220), Expect = 1e-19
Identities = 45/109 (41%), Positives = 62/109 (56%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGASTS 302
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QL S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 303 REL*WWTLSLEPWTPSVPGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
L E + GK D +V G+S A NNW++G+Y +G
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQG 109
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 54.0 bits (124), Expect = 5e-08
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
+ +++E+ GK+VPRA+ VDLEP +D +R+G +G +F PD
Sbjct: 52 LQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPD 93
Score = 49.2 bits (112), Expect = 1e-06
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTI--TKLQGAST 299
RE V I GQ G QIG WE+ EHG+D G + + S+ + G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 300 SREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G G + G+ A NN+A+GHYT G
Sbjct: 66 PRAI---YVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIG 114
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 52.4 bits (120), Expect = 1e-07
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+
Sbjct: 55 INTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPE 96
Score = 38.3 bits (85), Expect = 0.003
Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 2/110 (1%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGASTSR 305
RE++ I GQ G QIG WE+ EHGI G + D + A
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 306 EL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
+ LEP G + G+ A N +A+G YT G
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIG 117
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 52.4 bits (120), Expect = 1e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRA+ VDLEP +D VR+G + ++F P+
Sbjct: 50 NTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPE 90
Score = 49.6 bits (113), Expect = 1e-06
Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL-NASMSTI--TKLQGA 293
MREIV I GQ G QIG WE+ EHGI G D+ + + S +T G
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 294 STSREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G K + G+ A NN+A+GHYT G
Sbjct: 61 HVPRAI---FVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIG 111
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 52.4 bits (120), Expect = 1e-07
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
IN ++ E +GGK+VPR + VDLEP +D VR+G + +F P+
Sbjct: 27 INTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPE 68
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 52.0 bits (119), Expect = 2e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
N +++E GK+VPRA+MVDLEP +D +R+G + +F P+
Sbjct: 55 NTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPE 95
Score = 48.4 bits (110), Expect = 2e-06
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL-NASMSTI--TKLQGAS 296
RE++ I GQ G Q+G WE+ EHGI G + + L + + S +T + G
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKH 66
Query: 297 TSREL*WWTLSLEPWTPSVPGRLG--KSSDRTTSVF-GQSXAVNNWAKGHYTEG 449
R + + LEP TP R G K+ + G+ A NN+A+GHYT G
Sbjct: 67 VPRAI---MVDLEP-TPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIG 116
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 51.2 bits (117), Expect = 3e-07
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKL-QGAST 299
MRE++ I GQ G QIG WE+ EHGI G D + + + G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 300 SREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G K + G+ A NN+A+GHYT G
Sbjct: 61 PRSI---FVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Score = 47.6 bits (108), Expect = 4e-06
Identities = 15/39 (38%), Positives = 29/39 (74%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
++++ G+YVPR++ VDLEP +D +R+G + ++F P+
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPE 88
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 51.2 bits (117), Expect = 3e-07
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKL-QGAST 299
MRE++ I GQ G QIG WE+ EHGI G D + + + G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 300 SREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G K + G+ A NN+A+GHYT G
Sbjct: 61 PRSI---FVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Score = 47.6 bits (108), Expect = 4e-06
Identities = 15/39 (38%), Positives = 29/39 (74%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
++++ G+YVPR++ VDLEP +D +R+G + ++F P+
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPE 88
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.8 bits (116), Expect = 4e-07
Identities = 37/112 (33%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGASTS 302
MRE++ I GQ G QIG WE+ EHGI G + Q N S T
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSE---QQNEGGSFTTFFSDTGNG 57
Query: 303 REL*WWT-LSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G K + G+ A NN+A+GHYT G
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Score = 47.2 bits (107), Expect = 6e-06
Identities = 15/39 (38%), Positives = 29/39 (74%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
++++ G+YVPR++ VDLEP +D +R+G + ++F P+
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPE 88
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.8 bits (116), Expect = 4e-07
Identities = 37/112 (33%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGASTS 302
MRE++ I GQ G QIG WE+ EHGI G + Q N S T
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSE---QQNEGGSFTTFFSDTGNG 57
Query: 303 REL*WWT-LSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G K + G+ A NN+A+GHYT G
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Score = 47.2 bits (107), Expect = 6e-06
Identities = 15/39 (38%), Positives = 29/39 (74%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
++++ G+YVPR++ VDLEP +D +R+G + ++F P+
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPE 88
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 50.4 bits (115), Expect = 6e-07
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+
Sbjct: 50 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPE 90
Score = 49.2 bits (112), Expect = 1e-06
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGAS- 296
MRE++ I GQ G QIG WE+ EHGI G D L + S ST G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 297 -TSREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G + G+ A NN+A+GHYT G
Sbjct: 61 HVPRAV---MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIG 111
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 50.4 bits (115), Expect = 6e-07
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+
Sbjct: 49 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPE 89
Score = 47.2 bits (107), Expect = 6e-06
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGAS-- 296
RE++ I GQ G QIG WE+ EHGI G D L + S ST G+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 297 TSREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G + G+ A NN+A+GHYT G
Sbjct: 61 VPRAV---MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIG 110
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 50.4 bits (115), Expect = 6e-07
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+
Sbjct: 50 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPE 90
Score = 49.2 bits (112), Expect = 1e-06
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGAS- 296
MRE++ I GQ G QIG WE+ EHGI G D L + S ST G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 297 -TSREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G + G+ A NN+A+GHYT G
Sbjct: 61 HVPRAV---MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIG 111
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 50.4 bits (115), Expect = 6e-07
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
+ +++E G++VPRAVMVDLEP +D +R+G + +F P+
Sbjct: 50 STFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPE 90
Score = 49.2 bits (112), Expect = 1e-06
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLNASMSTITKLQGAS- 296
MRE++ I GQ G QIG WE+ EHGI G D L + S ST G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 297 -TSREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G + G+ A NN+A+GHYT G
Sbjct: 61 HVPRAV---MVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIG 111
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 49.6 bits (113), Expect = 1e-06
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGAS-- 296
MRE++ I GQ G QIG WE+ EHGI G S + S +T G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNE-GESFTTFFSDTGSGRY 59
Query: 297 TSREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G K + G+ A NN+A+GHYT G
Sbjct: 60 VPRSI---FVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Score = 47.6 bits (108), Expect = 4e-06
Identities = 15/39 (38%), Positives = 29/39 (74%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
++++ G+YVPR++ VDLEP +D +R+G + ++F P+
Sbjct: 50 FFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPE 88
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 49.6 bits (113), Expect = 1e-06
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITKLQGAS-- 296
MRE++ I GQ G QIG WE+ EHGI G S + S +T G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNE-GESFTTFFSDTGSGRY 59
Query: 297 TSREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G K + G+ A NN+A+GHYT G
Sbjct: 60 VPRSI---FVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Score = 47.6 bits (108), Expect = 4e-06
Identities = 15/39 (38%), Positives = 29/39 (74%)
Frame = +2
Query: 269 YYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
++++ G+YVPR++ VDLEP +D +R+G + ++F P+
Sbjct: 50 FFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPE 88
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 46.4 bits (105), Expect = 1e-05
Identities = 37/113 (32%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGI--DATGAYSGDSDLQLNASMSTITKLQGAS 296
MRE++ I GQ G QIG WE+ EHGI D T + L S G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSMEPDGNSGSLGTFFSDTG--YGRH 58
Query: 297 TSREL*WWTLSLEPWTPSV--PGRLGKSSDRTTSVFGQSXAVNNWAKGHYTEG 449
R + + LEP G K + G+ A NN+A+GHYT G
Sbjct: 59 VPRSI---FVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVG 108
Score = 45.2 bits (102), Expect = 2e-05
Identities = 14/42 (33%), Positives = 30/42 (71%)
Frame = +2
Query: 260 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPD 385
+ ++++ G++VPR++ VDLEP +D +R+G + ++F P+
Sbjct: 46 LGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPE 87
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 42.7 bits (96), Expect = 1e-04
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 132 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDNFXLRTVXGG 415
++ + +A YVPRAV+VDLEP ++ + P F +F DN + GG
Sbjct: 50 DLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGG 101
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 42.7 bits (96), Expect = 1e-04
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 132 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 248
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDNFXLRTVXGG 415
++ + +A YVPRAV+VDLEP ++ + P F +F DN + GG
Sbjct: 50 DLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGG 101
>AF003137-9|AAB93646.3| 883|Caenorhabditis elegans Hypothetical
protein C27A12.9 protein.
Length = 883
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 168 IGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTITK 281
IG + SD+HG+ +TG + G+S+ ++ A + +K
Sbjct: 245 IGQTIETMKSDDHGMTSTGDHGGESENEIRAGILVHSK 282
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 79 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLT 258
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAVC 123
Query: 259 HQ 264
++
Sbjct: 124 YK 125
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = -1
Query: 449 PLCVMSFRPVIHRXRLSEDXSCPVGRFAQTARNGRSPWFQAQG 321
P C+ +P+IH LS++ +CPV + + + + +G
Sbjct: 58 PPCLHPGQPIIHWPDLSDNLACPVPGLPDSVHSSQISLLEGEG 100
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = -1
Query: 449 PLCVMSFRPVIHRXRLSEDXSCPVGRFAQTARNGRSPWFQAQG 321
P C+ +P+IH LS++ +CPV + + + + +G
Sbjct: 58 PPCLHPGQPIIHWPDLSDNLACPVPGLPDSVHSSQISLLEGEG 100
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = -1
Query: 449 PLCVMSFRPVIHRXRLSEDXSCPVGRFAQTARNGRSPWFQAQG 321
P C+ +P+IH LS++ +CPV + + + + +G
Sbjct: 58 PPCLHPGQPIIHWPDLSDNLACPVPGLPDSVHSSQISLLEGEG 100
>U29244-5|AAC71090.1| 378|Caenorhabditis elegans Hypothetical
protein ZK1248.9 protein.
Length = 378
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 342 TPSVPGRLGKSSDRTTSVFG 401
TP+ PG LGK D T++FG
Sbjct: 42 TPTEPGTLGKQVDVGTNIFG 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,222,788
Number of Sequences: 27780
Number of extensions: 233420
Number of successful extensions: 699
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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