Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1185
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99714-4|CAI17880.1|  708|Homo sapiens Hermansky-Pudlak syndrome...    30   7.2  
CR456392-1|CAG30278.1|  708|Homo sapiens bK1048E9.4 protein.           30   7.2  
BC065030-1|AAH65030.1|  708|Homo sapiens Hermansky-Pudlak syndro...    30   7.2  
AY043416-1|AAK95330.1|  708|Homo sapiens LE protein protein.           30   7.2  
AL365512-1|CAB97208.1|  703|Homo sapiens hypothetical protein pr...    30   7.2  
AB051454-1|BAB33337.1|  505|Homo sapiens KIAA1667 protein protein.     30   7.2  
AC005578-1|AAC33490.1|  598|Homo sapiens F20887_1, partial CDS p...    29   9.5  
AB075861-1|BAB85567.1|  863|Homo sapiens KIAA1981 protein protein.     29   9.5  

>Z99714-4|CAI17880.1|  708|Homo sapiens Hermansky-Pudlak syndrome 4
           protein.
          Length = 708

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 225 EGHGQPGRLCSQASAVAQTAGIIAH-LSAGI-PGDACAAANVINSYTDGVR 371
           E H  PG  CS  SA  Q AG  A  +S+ + P ++C     +N YT  V+
Sbjct: 499 ESHAAPGLECSSGSANCQGAGPSADGISSRLTPAESCMGLVRMNLYTHCVK 549


>CR456392-1|CAG30278.1|  708|Homo sapiens bK1048E9.4 protein.
          Length = 708

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 225 EGHGQPGRLCSQASAVAQTAGIIAH-LSAGI-PGDACAAANVINSYTDGVR 371
           E H  PG  CS  SA  Q AG  A  +S+ + P ++C     +N YT  V+
Sbjct: 499 ESHAAPGLECSSGSANCQGAGPSADGISSRLTPAESCMGLVRMNLYTHCVK 549


>BC065030-1|AAH65030.1|  708|Homo sapiens Hermansky-Pudlak syndrome
           4 protein.
          Length = 708

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 225 EGHGQPGRLCSQASAVAQTAGIIAH-LSAGI-PGDACAAANVINSYTDGVR 371
           E H  PG  CS  SA  Q AG  A  +S+ + P ++C     +N YT  V+
Sbjct: 499 ESHAAPGLECSSGSANCQGAGPSADGISSRLTPAESCMGLVRMNLYTHCVK 549


>AY043416-1|AAK95330.1|  708|Homo sapiens LE protein protein.
          Length = 708

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 225 EGHGQPGRLCSQASAVAQTAGIIAH-LSAGI-PGDACAAANVINSYTDGVR 371
           E H  PG  CS  SA  Q AG  A  +S+ + P ++C     +N YT  V+
Sbjct: 499 ESHAAPGLECSSGSANCQGAGPSADGISSRLTPAESCMGLVRMNLYTHCVK 549


>AL365512-1|CAB97208.1|  703|Homo sapiens hypothetical protein
           protein.
          Length = 703

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 225 EGHGQPGRLCSQASAVAQTAGIIAH-LSAGI-PGDACAAANVINSYTDGVR 371
           E H  PG  CS  SA  Q AG  A  +S+ + P ++C     +N YT  V+
Sbjct: 494 ESHAAPGLECSSGSANCQGAGPSADGISSRLTPAESCMGLVRMNLYTHCVK 544


>AB051454-1|BAB33337.1|  505|Homo sapiens KIAA1667 protein protein.
          Length = 505

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 225 EGHGQPGRLCSQASAVAQTAGIIAH-LSAGI-PGDACAAANVINSYTDGVR 371
           E H  PG  CS  SA  Q AG  A  +S+ + P ++C     +N YT  V+
Sbjct: 296 ESHAAPGLECSSGSANCQGAGPSADGISSRLTPAESCMGLVRMNLYTHCVK 346


>AC005578-1|AAC33490.1|  598|Homo sapiens F20887_1, partial CDS
           protein.
          Length = 598

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = -3

Query: 515 HLRTTQGWSDRVSELTRVDDELIDKIQVLSHVSEEGTERLSEA 387
           HL + Q   ++V+ LTR + EL++K+Q+L +  ++ T+   EA
Sbjct: 235 HLASLQ---EQVAVLTRQNQELMEKVQILENFEKDETQMEVEA 274


>AB075861-1|BAB85567.1|  863|Homo sapiens KIAA1981 protein protein.
          Length = 863

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = -3

Query: 515 HLRTTQGWSDRVSELTRVDDELIDKIQVLSHVSEEGTERLSEA 387
           HL + Q   ++V+ LTR + EL++K+Q+L +  ++ T+   EA
Sbjct: 431 HLASLQ---EQVAVLTRQNQELMEKVQILENFEKDETQMEVEA 470


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,059,909
Number of Sequences: 237096
Number of extensions: 1777673
Number of successful extensions: 5023
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5023
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)