Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1183
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-12|AAV58884.1| 137|Caenorhabditis elegans Hypothetical p... 70 1e-12
U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical p... 70 1e-12
U39851-10|AAM22035.1| 144|Caenorhabditis elegans Hypothetical p... 70 1e-12
Z35663-16|CAA84726.2| 462|Caenorhabditis elegans Hypothetical p... 29 4.2
AF016435-4|AAB65880.2| 330|Caenorhabditis elegans Serpentine re... 25 5.1
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 28 5.6
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 28 5.6
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 28 5.6
AF043693-2|AAB97535.2| 351|Caenorhabditis elegans Hypothetical ... 28 5.6
AF039720-6|AAB96700.1| 347|Caenorhabditis elegans Hypothetical ... 28 5.6
U70845-3|AAB09101.1| 244|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U39851-12|AAV58884.1| 137|Caenorhabditis elegans Hypothetical
protein C23G10.2c protein.
Length = 137
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/85 (44%), Positives = 50/85 (58%)
Frame = +2
Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEAG 433
I+S +GPYSQA+ A T+Y+SG LGLD + G QT Q+L NL VL+A
Sbjct: 10 ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAA 69
Query: 434 GAXLESXVKTTVXLASMDDFQTFNK 508
GA + VKTTV L ++ DF N+
Sbjct: 70 GADYGNVVKTTVLLQNIADFAAVNE 94
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 505 QIYAEYFPKACPARMTYEVXRLPLGAAVEIEAIXLCXD 618
++Y +YF PAR Y+V LP G VEIEA+ + +
Sbjct: 94 EVYGQYFKSPYPARAAYQVAALPKGGLVEIEAVAIAGE 131
>U39851-11|AAV58883.1| 171|Caenorhabditis elegans Hypothetical
protein C23G10.2a protein.
Length = 171
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/85 (44%), Positives = 50/85 (58%)
Frame = +2
Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEAG 433
I+S +GPYSQA+ A T+Y+SG LGLD + G QT Q+L NL VL+A
Sbjct: 44 ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAA 103
Query: 434 GAXLESXVKTTVXLASMDDFQTFNK 508
GA + VKTTV L ++ DF N+
Sbjct: 104 GADYGNVVKTTVLLQNIADFAAVNE 128
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 505 QIYAEYFPKACPARMTYEVXRLPLGAAVEIEAIXLCXD 618
++Y +YF PAR Y+V LP G VEIEA+ + +
Sbjct: 128 EVYGQYFKSPYPARAAYQVAALPKGGLVEIEAVAIAGE 165
>U39851-10|AAM22035.1| 144|Caenorhabditis elegans Hypothetical
protein C23G10.2b protein.
Length = 144
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/85 (44%), Positives = 50/85 (58%)
Frame = +2
Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEAG 433
I+S +GPYSQA+ A T+Y+SG LGLD + G QT Q+L NL VL+A
Sbjct: 17 ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAA 76
Query: 434 GAXLESXVKTTVXLASMDDFQTFNK 508
GA + VKTTV L ++ DF N+
Sbjct: 77 GADYGNVVKTTVLLQNIADFAAVNE 101
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 505 QIYAEYFPKACPARMTYEVXRLPLGAAVEIEAIXLCXD 618
++Y +YF PAR Y+V LP G VEIEA+ + +
Sbjct: 101 EVYGQYFKSPYPARAAYQVAALPKGGLVEIEAVAIAGE 138
>Z35663-16|CAA84726.2| 462|Caenorhabditis elegans Hypothetical
protein T04A8.3 protein.
Length = 462
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 258 VILFLLLYCYSNFXLNSFWAXLCLRTPVQNLLSSFLFFR 142
+ + L L CY+N ++ W+ +R V N SSFL R
Sbjct: 5 IFMGLCLLCYTNAQVDRDWSFQQIRWKVTNARSSFLRHR 43
>AF016435-4|AAB65880.2| 330|Caenorhabditis elegans Serpentine
receptor, class w protein8 protein.
Length = 330
Score = 25.0 bits (52), Expect(2) = 5.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 460 FHXRLQXSATSFKYMSQIVQSLTGL 386
FH + AT+F+Y+S+ S+ GL
Sbjct: 115 FHVMIDVLATTFQYLSRRCASILGL 139
Score = 21.8 bits (44), Expect(2) = 5.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -2
Query: 301 CLTVRTYWLIYFRRCYIVF 245
C ++ +L+ FR C I+F
Sbjct: 133 CASILGLFLVVFRTCSIIF 151
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +1
Query: 517 EYFPKACPARMTYEVXRLPLGAAVEIEAIXLCXDFGHSXRPAHALVHANNGTSLARIKIY 696
EYF + C R+ G + F S P H +V+ NN T + I++Y
Sbjct: 483 EYFAECCLCPKNETFVRVQAGIESAEQVGDKPKWFSESLMPVHFMVYPNNSTLDSAIRVY 542
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +1
Query: 517 EYFPKACPARMTYEVXRLPLGAAVEIEAIXLCXDFGHSXRPAHALVHANNGTSLARIKIY 696
EYF + C R+ G + F S P H +V+ NN T + I++Y
Sbjct: 483 EYFAECCLCPKNETFVRVQAGIESAEQVGDKPKWFSESLMPVHFMVYPNNSTLDSAIRVY 542
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +1
Query: 517 EYFPKACPARMTYEVXRLPLGAAVEIEAIXLCXDFGHSXRPAHALVHANNGTSLARIKIY 696
EYF + C R+ G + F S P H +V+ NN T + I++Y
Sbjct: 483 EYFAECCLCPKNETFVRVQAGIESAEQVGDKPKWFSESLMPVHFMVYPNNSTLDSAIRVY 542
>AF043693-2|AAB97535.2| 351|Caenorhabditis elegans Hypothetical
protein C34B2.3 protein.
Length = 351
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 95 TDSVIFLSFELLTYLHLKNKNELRRFC 175
T+++ L FEL L ++ KN+ ++FC
Sbjct: 78 TEAIKMLQFELFVLLTVEKKNQCKQFC 104
>AF039720-6|AAB96700.1| 347|Caenorhabditis elegans Hypothetical
protein F33D11.7 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 95 TDSVIFLSFELLTYLHLKNKNELRRFC 175
T+++ L FEL L ++ KN+ ++FC
Sbjct: 77 TEAIKMLQFELFVLLTVEKKNQCKQFC 103
>U70845-3|AAB09101.1| 244|Caenorhabditis elegans Hypothetical
protein F22H10.4 protein.
Length = 244
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 495 KLSTNLCRIFS*SLPCSNDIRSXSTTVGSSCGDRGHRSLXRL 620
++S +IF +PC+ DI T G SCG R +L L
Sbjct: 143 QVSVMFGQIFERQIPCTVDINYEQQTDGYSCGYRAIGALVDL 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,110,345
Number of Sequences: 27780
Number of extensions: 302299
Number of successful extensions: 682
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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