Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1181
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68303-4|CAA92637.1|  210|Caenorhabditis elegans Hypothetical pr...    59   2e-09

>Z68303-4|CAA92637.1|  210|Caenorhabditis elegans Hypothetical
           protein ZK809.3 protein.
          Length = 210

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 30/65 (46%), Positives = 40/65 (61%)
 Frame = +2

Query: 41  MTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKP 220
           M++   +A ER R  G++ AER WRK+W+ DQ L A EPV V+   R+  NPIR  YR P
Sbjct: 41  MSLELHMADERVRAAGLSPAEREWRKKWVHDQHLHADEPVVVDAVHRQ-LNPIRTAYRLP 99

Query: 221 LDVLF 235
            D  +
Sbjct: 100 WDKFY 104



 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 247 PNAGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGG 378
           P  G       R  + KL +  V + + +YY+KY   DWT   G
Sbjct: 110 PTFGVYYGTAIRVTAPKLLMAFVVVQTAYYYWKYEVKDWTHLRG 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,878,634
Number of Sequences: 27780
Number of extensions: 297396
Number of successful extensions: 767
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)