Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1175
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   0.64 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   4.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.8  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    20   7.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    20   7.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    20   7.8  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 0.64
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 90  NFKKKYFWPNSY 55
           + K++Y+WPN Y
Sbjct: 151 SMKREYYWPNMY 162


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 116 IAQPHYIPGYTGHCPEYKY 172
           I   +Y+ GY G  P Y +
Sbjct: 372 INHQNYVQGYQGEHPNYNH 390


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 116 IAQPHYIPGYTGHCPEYKY 172
           I   +Y+ GY G  P Y +
Sbjct: 320 INHQNYVQGYQGEHPNYNH 338


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 297 SVLDGRSGSHR 265
           SV +GR GSHR
Sbjct: 253 SVGEGRDGSHR 263



 Score = 20.2 bits (40), Expect = 7.8
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +1

Query: 13   DIFDFLNSKLCFNY 54
            D++D+ N+    NY
Sbjct: 2535 DVYDYFNANFSLNY 2548


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 174 GSAIRMARNTQDPSRSERAAFREAGAIDRTADDFQIYRP 290
           G+  ++ R +   SRS  AAF+   A+       Q + P
Sbjct: 170 GTTGKLRRRSTAASRSRLAAFKRTIALGAFYQPLQPFPP 208


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory
          receptor candidate 27 protein.
          Length = 346

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 40 IWNLKNQKYRLF 5
          +W+++N  YRL+
Sbjct: 22 VWHVENPTYRLY 33


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -1

Query: 123 WAILTKSRAIVNFKKKYFWPN 61
           W  L  +    N  +KY+W N
Sbjct: 39  WYYLLTNLTYNNTNRKYYWLN 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,284
Number of Sequences: 336
Number of extensions: 2101
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)