Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1175
         (399 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion transporter|...    26   1.9  
SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces pom...    26   2.5  
SPAPB1A10.11c |||glutamyl-tRNA synthetase, mitochondrial|Schizos...    25   4.3  
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    25   5.7  
SPAP8A3.07c |||phospho-2-dehydro-3-deoxyheptonate aldolase |Schi...    25   5.7  
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ...    25   5.7  
SPBP4H10.10 |||rhomboid family protease|Schizosaccharomyces pomb...    25   5.7  
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ...    25   5.7  
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ...    24   7.6  
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ...    24   7.6  
SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces p...    24   10.0 
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1...    24   10.0 
SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase |Schiz...    24   10.0 

>SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 617

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 100 SGFSQYRPTALYSWVHGSL-SRVQVSDRRYVWLATHKILLDPSVQHSE 240
           S  S+  PT  Y   +  + +R + SDR++   + H+  +DPS+Q  E
Sbjct: 3   SNTSRSVPTGFYYKQNARMQNRPRFSDRKHSSKSKHRFPVDPSLQPDE 50


>SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 338

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 202 HKILLDPSVQHSERLVLSIERPMTSRSTVQHR 297
           ++ ++D  VQHS+RL  S  + ++ RST  H+
Sbjct: 307 YETVVDDLVQHSKRLRNSGRKFLSRRSTSSHK 338


>SPAPB1A10.11c |||glutamyl-tRNA synthetase,
           mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 526

 Score = 25.0 bits (52), Expect = 4.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 114 LTKSRAIVNFKKKYFWPNSYV 52
           LTKS +IV F+K YF   +Y+
Sbjct: 333 LTKSSSIVAFEKLYFLNKNYL 353


>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 534

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 260 SIDSTSLSECCTLGSRRILCVASHTYRRS 174
           S+ S S     T  S  +L  +SHTY RS
Sbjct: 440 SLSSLSSKPILTASSSSLLTSSSHTYERS 468


>SPAP8A3.07c |||phospho-2-dehydro-3-deoxyheptonate aldolase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 372

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 378 PXDPGIHGSLXTGXAITETCVHDXYPRSVLD 286
           P  PG+  +L  G +IT+ CV       +LD
Sbjct: 326 PIRPGVKDTLKYGVSITDACVSWEQTAPMLD 356


>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 2493

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = -2

Query: 302 LVLCWTVDLEVIGRSIDSTSLSECCTLGSRRILCVASHTYRRSDTC 165
           ++  W+  + +I  S+ S  + + C L  R++  V+S +    D C
Sbjct: 466 IISLWSSLMIIISSSLGSDEIYKACLLFLRKLEDVSSESVLLGDIC 511


>SPBP4H10.10 |||rhomboid family protease|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 392

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 52  YITIRPKIFFFEIYNGSGFSQYRPTALYSWVHGSLSRVQVS 174
           Y + R  I        S  + +RP  ++S  H SLS V VS
Sbjct: 17  YASNRVGILIPPFQTASSLNIFRPYVIFSRSHRSLSSVDVS 57


>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 3655

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 25  FLNSKLCFNYITIRPKIFFFEIYNGSGFSQYRPTALY 135
           FL +   F  +T +    FFE+  G GFS +RP  +Y
Sbjct: 530 FLTNIKPFEAVTFQK--LFFEV--GKGFSYFRPEQVY 562


>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
           Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1894

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 193 AIRIADPILVLGTMTRVPRNIMRLGDTD*IQSH-CKFQKKIFL 68
           ++   DPILVL TM     NI  LG      SH C +Q KI L
Sbjct: 676 SLSFRDPILVLSTMKPYLCNITFLG------SHLCIWQPKILL 712


>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 673

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 90  LQWLWI*SVSPNRIIFLGTRVIVPSTSIGS 179
           LQ  W  S+  N  I +G  VI+P+  +GS
Sbjct: 553 LQTYW--SIGINLFILIGCYVIIPTALLGS 580


>SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 489

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +2

Query: 134 IPGYTGHCPEYKYRIGDTYGSQHTRSFSIRACSIQRG 244
           I  Y   CPEYK RI D      +R     A SI  G
Sbjct: 152 ISAYFYLCPEYKVRI-DGVVKPRSRFLGNSAASIMEG 187


>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1023

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = +1

Query: 49   NYITIRPKIFFFEIYNGSGFSQYRPTALYSWVHGSLSRVQVSDRRYVWLATHKILLDPSV 228
            N+  +R  +  FE YN    +  RP+ +      SL+   VS    +   +  I L P +
Sbjct: 770  NHAYLRSHVSLFETYNDDEATSLRPSPIRLLSQKSLA--SVSSVSSISTYSSSIELTPQI 827

Query: 229  QHSERLVLSIERPMTSRS-TVQHRTR 303
              +    L+ E+P    S  ++H TR
Sbjct: 828  TKTS---LNREKPALHGSINLKHSTR 850


>SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 490

 Score = 23.8 bits (49), Expect = 10.0
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +1

Query: 112 QYRPTALYS-WVHGSLSRVQVSDRRYVWLATHKIL-LDPSVQHSERLVLSIERPMTSRST 285
           +Y P  L S +   + +RV     R      H+ L +  + QH  R+++     MT    
Sbjct: 171 RYSPAQLRSDFQRNNWNRVVAFQTRNPMHRAHRELTVRAAKQHGARVLIHPVVGMTKPGD 230

Query: 286 VQHRTRIXIVDA 321
           + H TR+ + +A
Sbjct: 231 IDHFTRVRVYEA 242


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,741,289
Number of Sequences: 5004
Number of extensions: 35961
Number of successful extensions: 86
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)