Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1175
(399 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ302661-1|CAC35526.1| 128|Anopheles gambiae gSG8 protein protein. 24 2.4
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 24 2.4
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 3.1
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 4.1
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 22 9.5
AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor O... 22 9.5
AY363726-1|AAR14939.1| 331|Anopheles gambiae seven transmembran... 22 9.5
AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembran... 22 9.5
AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding pr... 22 9.5
AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding pr... 22 9.5
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s... 22 9.5
>AJ302661-1|CAC35526.1| 128|Anopheles gambiae gSG8 protein protein.
Length = 128
Score = 23.8 bits (49), Expect = 2.4
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -2
Query: 386 PKTXXILXSMEAXKRDXPLRKRASTMXILVLCWTVDL 276
P +L S+ + D + R ST +LCW + L
Sbjct: 10 PVPLFLLLSLATLRGDPFVALRTSTTNRTLLCWAIKL 46
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 23.8 bits (49), Expect = 2.4
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 184 YVWLATHKILLDPSVQHSERLVLSIERPMTSRSTVQHRTRIXIVDARFR 330
Y W K L D + ER+ LS + S + HRT +++ R
Sbjct: 364 YWWTPAIKRLRDDCLAARERVQLSHDLEERSMAAAAHRTAKSLLEKAIR 412
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.4 bits (48), Expect = 3.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 177 SAIRMARNTQDPSRSERAAFREAGAIDRTADDFQIYRPAQNE 302
+A R ARN Q +R + + G ++ + Q+Y PA ++
Sbjct: 1048 AARRAARNRQARARRAQERAEQLGDVELVSAFRQLYGPAASD 1089
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.0 bits (47), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 184 IADPILVLGTMTRVPRNIMRLGD 116
++DP L+ G + P N++ L D
Sbjct: 445 VSDPNLIEGGLLYTPENLINLSD 467
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 21.8 bits (44), Expect = 9.5
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +2
Query: 80 FLKFTMALDLVSIAQPHYIPGYTGHC 157
+LK ++D++ + P P HC
Sbjct: 938 YLKMQSSVDVIQVVVPVKAPNVLPHC 963
>AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor
Or83b protein.
Length = 478
Score = 21.8 bits (44), Expect = 9.5
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3
Query: 385 RKPXGSWXPWKLXNG 341
R P SW PW +G
Sbjct: 176 RLPIKSWYPWNAMSG 190
>AY363726-1|AAR14939.1| 331|Anopheles gambiae seven transmembrane G
protein-coupledreceptor protein.
Length = 331
Score = 21.8 bits (44), Expect = 9.5
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3
Query: 385 RKPXGSWXPWKLXNG 341
R P SW PW +G
Sbjct: 29 RLPIKSWYPWNAMSG 43
>AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembrane G
protein-coupledreceptor protein.
Length = 478
Score = 21.8 bits (44), Expect = 9.5
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3
Query: 385 RKPXGSWXPWKLXNG 341
R P SW PW +G
Sbjct: 176 RLPIKSWYPWNAMSG 190
>AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP34 protein.
Length = 311
Score = 21.8 bits (44), Expect = 9.5
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 6/32 (18%)
Frame = -2
Query: 191 HTYRRSDTC------TRDNDPCTQEYNAVGRY 114
H R++ C T D+D CTQ Y A Y
Sbjct: 115 HNVERTEACLAENLYTCDDDLCTQVYKAFQCY 146
>AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP37 protein.
Length = 311
Score = 21.8 bits (44), Expect = 9.5
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 6/32 (18%)
Frame = -2
Query: 191 HTYRRSDTC------TRDNDPCTQEYNAVGRY 114
H R++ C T D+D CTQ Y A Y
Sbjct: 115 HNVERTEACLAENLYTCDDDLCTQVYKAFQCY 146
>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
symporter protein.
Length = 1127
Score = 21.8 bits (44), Expect = 9.5
Identities = 11/42 (26%), Positives = 16/42 (38%)
Frame = +1
Query: 88 IYNGSGFSQYRPTALYSWVHGSLSRVQVSDRRYVWLATHKIL 213
I SG + RP L G R + ++ + HK L
Sbjct: 766 IMQASGIGKLRPNVLLMGFKGDWDRCEPAELEQYFNVVHKAL 807
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,995
Number of Sequences: 2352
Number of extensions: 8633
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -