Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1174
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    59   2e-11
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    28   0.047
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.57 

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 59.3 bits (137), Expect = 2e-11
 Identities = 28/77 (36%), Positives = 51/77 (66%)
 Frame = +3

Query: 27  VEYLKGHQLEDVDVDDLMRXYTNDVIAXAGFGLQVNSLVDKDNEFYEXGQAMFSTSWPQR 206
           V++ +G + +DV++ ++   ++NDVIA A FG++VNS+ + +NEFY  G+++ + S  Q 
Sbjct: 115 VDFFQGRE-QDVEIKEVFSRFSNDVIATAAFGIRVNSVQEPNNEFYAMGRSLTTFSAFQI 173

Query: 207 FKMILAAQFPTLAKKIE 257
            K+ LA   P +A+  E
Sbjct: 174 LKIFLAHLVPKIAEFFE 190



 Score = 52.8 bits (121), Expect = 1e-09
 Identities = 29/73 (39%), Positives = 40/73 (54%)
 Frame = +2

Query: 230 VSNVSQENRIKVFPXKVTRFFREIXTSTMDYRLKNNVERPDMIQLLMDAYKGTLKXESNE 409
           V  +++    +V P KVT FF  +    M  R    + RPD+I LLM+A KG LK ++  
Sbjct: 182 VPKIAEFFEYRVLPRKVTDFFEGLILDNMQKREAEKIVRPDLIHLLMEARKGKLKHDN-- 239

Query: 410 SDEKNVGFAMTEE 448
           S+E   GFA  EE
Sbjct: 240 SNEGGEGFATVEE 252


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.047
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +3

Query: 33  YLKGHQLEDVDVDDLMRXYTNDVIAXAGFGLQVNSLVDKDNE 158
           +L+ H  E++DV   M+ Y+ D+I+   FG+      + ++E
Sbjct: 156 FLEDHT-EEIDVKTAMKKYSVDIISTCAFGINTYCFRNDNSE 196


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -1

Query: 287 NELLXVEILLFYFLG*RWKLCSQYHFKSLWPTCAKHCLTXLV 162
           N+L   ++LL       W +   YH   LW   + +C   L+
Sbjct: 229 NKLYGHQLLLTILTYLIWTIYEMYHLAILWSCTSTNCPRFLI 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,371
Number of Sequences: 336
Number of extensions: 1427
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)