Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1174
         (449 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75711-7|CAB00031.2|  380|Caenorhabditis elegans Hypothetical pr...    29   1.6  
AF286377-1|AAG10298.1|  380|Caenorhabditis elegans POU family II...    29   1.6  
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ...    28   3.6  
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ...    28   3.6  
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    27   6.3  

>Z75711-7|CAB00031.2|  380|Caenorhabditis elegans Hypothetical
           protein K02B12.1 protein.
          Length = 380

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 299 IXTSTMDYRLKNNVERPDMIQLLMDAYKGTLKXESNES 412
           + TST   ++K  VERP++IQ LM  +    +   ++S
Sbjct: 130 VVTSTPSCQIKQEVERPEIIQRLMPPWPPAYQFSCDDS 167


>AF286377-1|AAG10298.1|  380|Caenorhabditis elegans POU family III
           homeodomain proteinCEH-6 protein.
          Length = 380

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 299 IXTSTMDYRLKNNVERPDMIQLLMDAYKGTLKXESNES 412
           + TST   ++K  VERP++IQ LM  +    +   ++S
Sbjct: 130 VVTSTPSCQIKQEVERPEIIQRLMPPWPPAYQFSCDDS 167


>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
            protein Y38E10A.6b protein.
          Length = 1345

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 12/50 (24%), Positives = 27/50 (54%)
 Frame = +2

Query: 233  SNVSQENRIKVFPXKVTRFFREIXTSTMDYRLKNNVERPDMIQLLMDAYK 382
            +N     +I++   ++  +FR+   S+++    N  E P  ++LL +AY+
Sbjct: 1044 TNYQLSKQIRIGMPQIREWFRKKRESSVEEHRTNGTELPKQMKLLHEAYQ 1093


>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
            protein Y38E10A.6a protein.
          Length = 1343

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 12/50 (24%), Positives = 27/50 (54%)
 Frame = +2

Query: 233  SNVSQENRIKVFPXKVTRFFREIXTSTMDYRLKNNVERPDMIQLLMDAYK 382
            +N     +I++   ++  +FR+   S+++    N  E P  ++LL +AY+
Sbjct: 1042 TNYQLSKQIRIGMPQIREWFRKKRESSVEEHRTNGTELPKQMKLLHEAYQ 1091


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 106 PXPVSDSRLIRWSTRITNSTSXVK 177
           P P+    L+ W  R+TN  S VK
Sbjct: 329 PQPIDGETLLSWCQRVTNGYSHVK 352


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 106 PXPVSDSRLIRWSTRITNSTSXVK 177
           P P+    L+ W  R+TN  S VK
Sbjct: 329 PQPIDGETLLSWCQRVTNGYSHVK 352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,911,100
Number of Sequences: 27780
Number of extensions: 135133
Number of successful extensions: 381
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)