Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1174
         (449 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g19190.1 68415.m02239 light-responsive receptor protein kinas...    28   3.4  
At4g13770.1 68417.m02136 cytochrome P450 family protein                27   4.4  
At1g75380.3 68414.m08757 wound-responsive protein-related simila...    27   5.9  
At1g75380.2 68414.m08756 wound-responsive protein-related simila...    27   5.9  
At1g75380.1 68414.m08755 wound-responsive protein-related simila...    27   5.9  

>At2g19190.1 68415.m02239 light-responsive receptor protein kinase /
           senescence-responsive receptor-like serine/threonine
           kinase, putative (SIRK) similar to light repressible
           receptor protein kinase [Arabidopsis thaliana]
           gi|1321686|emb|CAA66376; contains Pfam profiles PF00069:
           Protein kinase domain and PF00560: Leucine Rich Repeat
          Length = 876

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
 Frame = +3

Query: 30  EYLKGHQLEDVDVDDLMRXYTNDVIAXAGFGLQVNSLV-------DKDNEFYEXGQAMFS 188
           E  +G++    +VD LMR +  ++ +  G+  ++N +V       +++   Y  G+  F 
Sbjct: 606 ESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSFI 665

Query: 189 TSWPQRFKMILAA 227
            SW +R K+ L A
Sbjct: 666 LSWEERLKISLDA 678


>At4g13770.1 68417.m02136 cytochrome P450 family protein
          Length = 502

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 54  EDVDVDDLMRXYTNDVIAXAGFGLQVN 134
           E VD+ +LM  +TN V+    FG + N
Sbjct: 166 EVVDISELMLTFTNSVVCRQAFGKKYN 192


>At1g75380.3 68414.m08757 wound-responsive protein-related similar
           to wound inducive gene GI:8096273 from [Nicotiana
           tabacum]
          Length = 325

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 346 SFYVVLQSIIHSAGXD--LSKETSYFXWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 176
           + Y V++ ++   G +  L + T      YF  +FL+ VGN +  +  +L     +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231


>At1g75380.2 68414.m08756 wound-responsive protein-related similar
           to wound inducive gene GI:8096273 from [Nicotiana
           tabacum]
          Length = 325

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 346 SFYVVLQSIIHSAGXD--LSKETSYFXWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 176
           + Y V++ ++   G +  L + T      YF  +FL+ VGN +  +  +L     +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231


>At1g75380.1 68414.m08755 wound-responsive protein-related similar
           to wound inducive gene GI:8096273 from [Nicotiana
           tabacum]
          Length = 325

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 346 SFYVVLQSIIHSAGXD--LSKETSYFXWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 176
           + Y V++ ++   G +  L + T      YF  +FL+ VGN +  +  +L     +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,349,431
Number of Sequences: 28952
Number of extensions: 121695
Number of successful extensions: 257
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)