Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1173
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 328 QCRSLLQHKTQQTCKDRRNRPSR 260
           QCRS+     + TC +  +RP R
Sbjct: 81  QCRSIKNECPEPTCDEPVHRPGR 103


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 198 CHSVLSCKS 172
           CH VLSCKS
Sbjct: 140 CHRVLSCKS 148


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 552 RFVKNXIHTRLWLRGTSFA 496
           +F +  + TRLW R  +FA
Sbjct: 558 QFDETSLDTRLWPRAAAFA 576


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 365 LAAESLEINIKNKMFC 412
           LAAES++  + N +FC
Sbjct: 99  LAAESIDDLLSNAVFC 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,885
Number of Sequences: 336
Number of extensions: 3573
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)