Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1171
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 147 5e-36
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 146 7e-36
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 144 4e-35
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 127 6e-30
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 109 1e-24
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 5e-20
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 83 9e-17
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 83 9e-17
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 83 2e-16
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 82 2e-16
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 5e-16
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 5e-16
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 6e-15
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 58 4e-09
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 47 8e-06
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 42 2e-04
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 42 2e-04
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 42 3e-04
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.005
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 33 0.17
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 31 0.40
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 30 0.92
SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29) 29 2.1
SB_38622| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_46614| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 147 bits (356), Expect = 5e-36
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGP GQI RPDNFVFGQSGAGNNWAKGHY
Sbjct: 260 INVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 319
Query: 437 TEGAELVDSV 466
TEGAELVDSV
Sbjct: 320 TEGAELVDSV 329
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 258
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 146 bits (355), Expect = 7e-36
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGP GQI RPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSV 466
TEGAELVDSV
Sbjct: 107 TEGAELVDSV 116
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 144 bits (349), Expect = 4e-35
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA+GGKYVPR+V++DLEPGTMDSVRSGP GQI RPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSV 466
TEGAEL+DSV
Sbjct: 107 TEGAELMDSV 116
Score = 90.2 bits (214), Expect = 8e-19
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 127 bits (306), Expect = 6e-30
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = +2
Query: 287 GKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 466
GKYVPRAV+VDLEPGTMDSVRSGP GQI RPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 109 bits (262), Expect = 1e-24
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 281 SGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVD 460
+GG+YVPR+++VDLEPGTMD+VR GP G + RPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 461 SVW 469
+++
Sbjct: 71 NIF 73
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 94.3 bits (224), Expect = 5e-20
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVF 394
INVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGP GQI RPDNFVF
Sbjct: 47 INVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 83.4 bits (197), Expect = 9e-17
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G Q+ P+ V G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGH 107
Query: 434 YTEGAELVDSV 466
YT G E+VD V
Sbjct: 108 YTVGKEIVDLV 118
Score = 83.0 bits (196), Expect = 1e-16
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G Q+ P+ + G+ A NN+A+GH
Sbjct: 481 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 540
Query: 434 YTEGAELVDSV 466
YT G E+VD V
Sbjct: 541 YTVGKEIVDLV 551
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 475
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 83.4 bits (197), Expect = 9e-17
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G Q+ P+ + G+ A NN+A+GH
Sbjct: 633 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 692
Query: 434 YTEGAELVDSV 466
YT G EL+D V
Sbjct: 693 YTVGKELIDLV 703
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G Q+ P+ + G+ A NN+A+GH
Sbjct: 112 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 171
Query: 434 YTEGAELVDSV 466
YT G E+VD V
Sbjct: 172 YTIGKEIVDLV 182
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSV 346
S N +++E GK+VPRAV VDLEP + +
Sbjct: 560 SFNTFFSETGAGKHVPRAVFVDLEPTVRECI 590
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 117 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
+ RE + + GQ G QIG WE+ EHGI G D +
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 106
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
+RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 627
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 82.6 bits (195), Expect = 2e-16
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G Q+ P+ + G+ A NN+A+GH
Sbjct: 47 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 106
Query: 434 YTEGAELVDSV 466
YT G E++D V
Sbjct: 107 YTVGKEIIDLV 117
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 41
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 82.2 bits (194), Expect = 2e-16
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G Q+ P+ + G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTEGAELVDSV 466
YT G E++D V
Sbjct: 108 YTIGKEIIDLV 118
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + I GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 81.8 bits (193), Expect = 3e-16
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G Q+ P+ + G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTEGAELVDSV 466
YT G E++D+V
Sbjct: 108 YTVGKEMIDTV 118
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 81.0 bits (191), Expect = 5e-16
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G Q+ P+ + G+ A NN+A+GH
Sbjct: 852 SFNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 911
Query: 434 YTEGAELVDSV 466
YT G E++D V
Sbjct: 912 YTVGKEMIDLV 922
Score = 78.6 bits (185), Expect = 3e-15
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
+ N ++ E GK+VPRAV VDLEP +D VR+G Q+ P+ + G+ A NN+A+GH
Sbjct: 419 AFNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 478
Query: 434 YTEGAELVDSV 466
YT G E +D V
Sbjct: 479 YTVGKEQIDIV 489
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 35.1 bits (77), Expect = 0.032
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 846
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 81.0 bits (191), Expect = 5e-16
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D +R+G Q+ P+ + G+ A NN+A+GH
Sbjct: 466 SFNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGH 525
Query: 434 YTEGAELVDSV 466
YT G + +D+V
Sbjct: 526 YTVGKDHIDNV 536
Score = 78.6 bits (185), Expect = 3e-15
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G Q+ P+ + G+ A NN+A+GH
Sbjct: 33 SFNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 92
Query: 434 YTEGAELVDSV 466
YT G +L++ V
Sbjct: 93 YTVGKQLIEIV 103
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE V I GQ G Q+G WE+ EHGI G D +
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 460
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 77.4 bits (182), Expect = 6e-15
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N ++ E GK+VPRAV VDLEP +D +R+G Q+ P+ + G+ A NN+A+GH
Sbjct: 13 SFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGH 72
Query: 434 YTEGAELVD 460
YT G E +D
Sbjct: 73 YTVGKEHID 81
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +2
Query: 272 NEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGHYTEGAE 451
+EA+ GKYVPRAV+VDLEP +D VR+G + P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 452 LVDSV 466
+V+ V
Sbjct: 1025 MVEVV 1029
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 58.0 bits (134), Expect = 4e-09
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP + P+ + G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGH 97
Query: 434 YTEGAELVDSV 466
YT G + VD V
Sbjct: 98 YTIGKQQVDQV 108
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +2
Query: 338 DSVRSGPXGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 466
D VR+G Q+ P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLV 55
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 47.2 bits (107), Expect = 8e-06
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +2
Query: 344 VRSGPXGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 466
VR+G Q+ P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLV 43
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 47.2 bits (107), Expect = 8e-06
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +2
Query: 344 VRSGPXGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 466
VR+G Q+ P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLV 43
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 344 VRSGPXGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVD 460
VR G + PD + G+ A NN+A+GHYT G E +D
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHID 41
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 344 VRSGPXGQIXRPDNFVFGQSGAGNNWAKGHYTEGAELVD 460
+R+G Q+ P+ + G+ A NN+A+GHYT G E +D
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHID 41
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +2
Query: 398 QSGAGNNWAKGHYTEGAELVDS 463
Q+ A NNWAKG YTEGAEL+DS
Sbjct: 2 QNSAANNWAKGFYTEGAELMDS 23
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVR 349
S N +++E GGK+VPRAV VDLEP + ++
Sbjct: 48 SFNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + + GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVRSGPXGQIXRPDNFVFGQSGAGNNW 421
RAV++D+E G ++++ GP + + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLEASMST 269
MRE + I GQ G QIG WE+ EHGI G D + + S ST
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFST 246
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVRS--GPXGQIXRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSV 466
RAV +D+E + S G P F Q G+GNNWA G G + +D V
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKV 124
Score = 31.9 bits (69), Expect = 0.30
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 129 IVHIQAGQCGNQIGAKFWEVISDE 200
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 473 TSRPNQPVQPPLCNVLSPSYSPPQTV 396
T RP+Q VQ PL L P Y PP V
Sbjct: 1077 TGRPHQAVQQPLPQQLPPQYRPPAIV 1102
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 30.7 bits (66), Expect = 0.70
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 177 FWEVISDEHGIDATG 221
FWEVI++EHGID G
Sbjct: 1 FWEVIAEEHGIDPDG 15
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 30.3 bits (65), Expect = 0.92
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2
Query: 408 APDCPKTKLSGRKICPXGPERTESMVPGSRSTITAR----GTYLP 286
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29)
Length = 190
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 198 EHGIDATGAYSGDSDLQLEASMSTITK 278
+HG+ TG + GDSD +L+A++ +K
Sbjct: 137 DHGMTRTGDHGGDSDDELDAALFVYSK 163
>SB_38622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3824
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 479 STTSRPNQPVQPPLCNVLSPSYSP 408
S +S P PV PP SP++SP
Sbjct: 3348 SMSSLPRSPVSPPSTQYSSPAFSP 3371
>SB_46614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 190 SRTSTALTPRVLTAATPTCSLKHQCLL*RSFRGQVRPASC 309
++ S LT L A P KH+C + + +G +R ASC
Sbjct: 181 TKQSRKLTFIALCATHPRNVAKHRCDIDKGHQGSLRKASC 220
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 399 CPKTKLSGRKICPXGPERTESMVPGSRSTITARGTYLPPEA 277
CP+ + RK P G + + G+ S + ++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 904
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 452 VQPPLCNVLSPSYSPPQTVRRRSCPVXRFAQXARNGRS-PWFQAQGPPSQL 303
V PP+C+ L S P S A+ A++G + W + + P +QL
Sbjct: 193 VHPPICDCLGCRISSPVVASPESIREAFEAENAKDGNADDWGEVKTPTNQL 243
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,848,514
Number of Sequences: 59808
Number of extensions: 353669
Number of successful extensions: 986
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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