Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1169
(613 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 148 9e-35
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 124 2e-27
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 117 2e-25
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 113 2e-24
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 100 3e-20
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 94 2e-18
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 89 6e-17
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 87 4e-16
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 84 3e-15
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 82 9e-15
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 78 2e-13
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 77 4e-13
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 76 6e-13
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 74 3e-12
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 69 9e-11
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 68 2e-10
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 67 4e-10
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 61 2e-08
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 60 3e-08
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 60 5e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 59 7e-08
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 57 3e-07
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 56 7e-07
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 53 5e-06
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 47 3e-04
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 47 4e-04
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 47 4e-04
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 46 5e-04
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 42 0.009
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 42 0.009
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 42 0.009
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 42 0.012
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 42 0.015
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 41 0.020
UniRef50_UPI00015B4F87 Cluster: PREDICTED: similar to prophenolo... 40 0.047
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 40 0.047
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 40 0.062
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 39 0.081
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 39 0.11
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 39 0.11
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 38 0.14
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.14
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.33
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.57
UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2; Clos... 35 1.8
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.8
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 35 1.8
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 2.3
UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p... 34 3.1
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 3.1
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 33 4.0
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 33 4.0
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 5.3
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 33 7.1
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 7.1
UniRef50_A6S819 Cluster: Citrate synthase; n=1; Botryotinia fuck... 32 9.3
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 9.3
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 32 9.3
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 148 bits (359), Expect = 9e-35
Identities = 76/135 (56%), Positives = 93/135 (68%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 199 SKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEKY 378
+KKELAAVRTVCSH+ENMIK + P+ ++ RNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 379 IRRVKMAPGVTVVNS 423
IRRV+MAPGVTVVNS
Sbjct: 121 IRRVEMAPGVTVVNS 135
Score = 111 bits (266), Expect = 2e-23
Identities = 60/107 (56%), Positives = 70/107 (65%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQK 434
KGVT GFQYKMRAVYAHFPINCVT+E N+ ++ + + QK
Sbjct: 80 KGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQK 139
Query: 435 DELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEKTLVV 575
DELI+EGN +E VS SAALIQQSTT + + RK LDGLY SEKT VV
Sbjct: 140 DELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 124 bits (298), Expect = 2e-27
Identities = 63/141 (44%), Positives = 90/141 (63%), Gaps = 2/141 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKW 192
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 193 FGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGE 372
+G++KELA VRT+CSHV+NMIK + P+ V L+ RNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 373 KYIRRVKMAPGVTVVNSQNKR 435
KYIRRV+M PGV SQ ++
Sbjct: 121 KYIRRVRMRPGVACSVSQAQK 141
Score = 95.9 bits (228), Expect = 7e-19
Identities = 53/106 (50%), Positives = 65/106 (61%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQK 434
KGVT GF+YKMR+VYAHFPIN V E S ++ + C QK
Sbjct: 82 KGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQK 141
Query: 435 DELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEKTLV 572
DELI+EGN +E VS+SAALIQQ+TT + + RK LDG+Y SEK V
Sbjct: 142 DELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 117 bits (282), Expect = 2e-25
Identities = 57/137 (41%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWF 195
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 196 GSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEK 375
G+++ +AA+RT SHV+N+I K + P+ S + RNFLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 376 YIRRVKMAPGVTVVNSQ 426
+R+V M GVT++ S+
Sbjct: 121 KVRKVDMLEGVTILRSE 137
Score = 78.2 bits (184), Expect = 1e-13
Identities = 45/108 (41%), Positives = 58/108 (53%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQKD 437
GVTKG++YKMR VYAHFPIN T N+ +K K KD
Sbjct: 82 GVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKD 141
Query: 438 ELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEKTLVVLD 581
EL+++GN +E VS SAALI Q + + RK LDG+Y S+K + D
Sbjct: 142 ELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 113 bits (273), Expect = 2e-24
Identities = 56/126 (44%), Positives = 79/126 (62%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 199 SKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEKY 378
+KE+AA+RTVCSH++NMIK K + P+ V+ + + RNFLGEK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKI 120
Query: 379 IRRVKM 396
+R V +
Sbjct: 121 VRPVPL 126
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 100 bits (239), Expect = 3e-20
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 199 SKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRV--IQLLRYRNFLGE 372
+K +AA+RTV S V+NMI K + P+ V+ + + + RNFLG+
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 373 KYIRRVKMAPGVTVVNSQN 429
K IR V + GVT+ S N
Sbjct: 121 KKIRNVPVRDGVTIEFSTN 139
Score = 72.9 bits (171), Expect = 5e-12
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQ----KGKDGTWCDCR*LS 425
GVTKG++YKMR VYAHFPIN E + + +DG + +
Sbjct: 81 GVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFS--T 138
Query: 426 KQKDELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEKTLVVLD 581
KDE+++ GNS+EDVS +AA +QQ R + RK LDG+Y S K + D
Sbjct: 139 NVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 94.3 bits (224), Expect = 2e-18
Identities = 44/124 (35%), Positives = 73/124 (58%)
Frame = +1
Query: 64 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 243
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 244 ENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEKYIRRVKMAPGVTVVNS 423
ENMI K + P+ V+ +++ RNF GEK +RR+++ G+T +
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRN 153
Query: 424 QNKR 435
+ +
Sbjct: 154 EKAK 157
Score = 79.0 bits (186), Expect = 8e-14
Identities = 42/105 (40%), Positives = 59/105 (56%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQKD 437
GVTKG++YKMR VYAHFPIN T+G ++ + C K KD
Sbjct: 99 GVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKD 158
Query: 438 ELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEKTLV 572
E+++ GNSLE +S S A IQ + + + RK LDG+Y SE+ ++
Sbjct: 159 EIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 89.4 bits (212), Expect = 6e-17
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 9/150 (6%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 171
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 172 LLKVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLR 351
+ V W +K+ V +V S + NMI+ + VL P+ ++ + Q +
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVE 120
Query: 352 YRNFLGEKYIRRVKMAPGVTVVNSQNKRMN 441
+NFLGEK IR +K PGVT+ ++ + N
Sbjct: 121 IKNFLGEKIIRTIKCLPGVTITRNEAEEKN 150
Score = 55.2 bits (127), Expect = 1e-06
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Frame = +3
Query: 201 QKGACRREDSLFTCREHDKGVTKGFQYKMRAVYAHFPI--NCVTTEGNSXXXXXXXXXXX 374
+K C+ R +GVT G+++KM YAHFPI N +
Sbjct: 71 RKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKII 130
Query: 375 XHQKGKDGTWCDCR*LSKQKDELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYG 554
K G R +++K+ L ++GN L +VS + ALI Q+ + + R+ LDG+Y
Sbjct: 131 RTIKCLPGVTIT-RNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQFLDGIYV 189
Query: 555 SEKTLVV 575
SEK L +
Sbjct: 190 SEKRLEI 196
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 86.6 bits (205), Expect = 4e-16
Identities = 46/131 (35%), Positives = 74/131 (56%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 201
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 202 KKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEKYI 381
+K A +R+V S + NMI + + L P+ ++ ++ RNFLGE+
Sbjct: 62 RKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERIT 121
Query: 382 RRVKMAPGVTV 414
R +K PGVTV
Sbjct: 122 RVIKCLPGVTV 132
Score = 79.4 bits (187), Expect = 6e-14
Identities = 47/102 (46%), Positives = 58/102 (56%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQKD 437
GVT+GF+YKMR VYAHFPIN TE + + K S KD
Sbjct: 81 GVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKD 140
Query: 438 ELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEK 563
E+I+EGNSLE+VS SAA I+Q R + RK LDG+Y SE+
Sbjct: 141 EIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSER 182
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 83.8 bits (198), Expect = 3e-15
Identities = 39/82 (47%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 192
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 193 FGSKKELAAVRTVCSHVENMIK 258
+G++KELA V T+CS V+N IK
Sbjct: 61 WGNRKELATVHTICSPVQNTIK 82
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 82.2 bits (194), Expect = 9e-15
Identities = 43/134 (32%), Positives = 68/134 (50%)
Frame = +1
Query: 28 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 207
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGK 61
Query: 208 ELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEKYIRR 387
A RT+CSH+ENM K + L P+ + + + + RNF+ + RR
Sbjct: 62 RNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRR 121
Query: 388 VKMAPGVTVVNSQN 429
++ PGVT+ S N
Sbjct: 122 IECLPGVTIAMSTN 135
Score = 66.1 bits (154), Expect = 6e-10
Identities = 40/105 (38%), Positives = 52/105 (49%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQK 434
KGVT GF+YKMR YAHFPI + N ++ + + K
Sbjct: 78 KGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVK 137
Query: 435 DELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEKTL 569
DELI+ G S+EDVS +AA I +S + RK LDG Y S + L
Sbjct: 138 DELILRGISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVSSRGL 182
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 77.8 bits (183), Expect = 2e-13
Identities = 47/125 (37%), Positives = 75/125 (60%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 220 VRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEKYIRRVKMA 399
VRT +H+ NMIK + R + P+TV ++ +++ NFLGEK RR K+
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTVK-VQGDEVV-IENFLGEKNPRRAKIL 125
Query: 400 PGVTV 414
PGVTV
Sbjct: 126 PGVTV 130
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 76.6 bits (180), Expect = 4e-13
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 192
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 193 FGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGE 372
+G++++ A VRT+ SH++NMI K + + P+T+ + ++ +NFLGE
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGE 128
Query: 373 KYIRRVKMAPGVTV 414
K R ++M GV V
Sbjct: 129 KRTRHIEMYDGVVV 142
Score = 71.3 bits (167), Expect = 2e-11
Identities = 46/110 (41%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTE-GNSXXXXXXXXXXXX-HQKGKDGTWCDCR*LSKQ 431
GVTKG+QYKMR VYAHFP+ V + G S H + DG
Sbjct: 91 GVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVVK----KLG 146
Query: 432 KDELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEKTLVVLD 581
KDE+ +EGN +E VS SAA I + R + R+ LDG+Y SEK L+ D
Sbjct: 147 KDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVYVSEKCLIEND 196
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 76.2 bits (179), Expect = 6e-13
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = +1
Query: 19 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 186
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 187 KWFGSKKELAAVRTVCSHVENMI 255
WFG K A +RTVCSH+ENMI
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMI 142
Score = 38.3 bits (85), Expect = 0.14
Identities = 16/29 (55%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINC-VTTEGNS 341
GV + +QYK+R VYAHFPIN +T +G++
Sbjct: 144 GVRQRYQYKLRFVYAHFPINSNITNDGST 172
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 73.7 bits (173), Expect = 3e-12
Identities = 43/107 (40%), Positives = 57/107 (53%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQK 434
KGVT GFQYKMRAVYAHFPIN + + + QK
Sbjct: 142 KGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQK 201
Query: 435 DELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEKTLVV 575
D++++EGN ++ VS SAAL+ +T R + RK LDG+Y + K VV
Sbjct: 202 DQVLVEGNDIDLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
Score = 46.4 bits (105), Expect = 5e-04
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +1
Query: 115 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTR 285
V +++ KH+ +D R++ + +K W +K A +RT + V NMIK +
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 286 CVLCMLTSPLTVSPLRVIQLLRYRNFLGEKYIRRVKMAPGVTV 414
P+ + + RNFLGEK +R + M GVT+
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTI 194
Score = 33.9 bits (74), Expect = 3.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 129
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 68.9 bits (161), Expect = 9e-11
Identities = 45/103 (43%), Positives = 57/103 (55%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQK 434
KGV+ GF+YK+R+VYAHFP+N V T C QK
Sbjct: 47 KGVSLGFRYKVRSVYAHFPLNVVQMR----------------------TGVACSVSQAQK 84
Query: 435 DELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEK 563
DELI+EGN E VS+SAALIQ++T + RK +DG+Y SEK
Sbjct: 85 DELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Score = 37.1 bits (82), Expect = 0.33
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 205 KELAAVRTVCSHVENMIK 258
KELA VRT+CSHV+NMIK
Sbjct: 30 KELATVRTICSHVQNMIK 47
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 67.7 bits (158), Expect = 2e-10
Identities = 42/125 (33%), Positives = 72/125 (57%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 220 VRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEKYIRRVKMA 399
RT +H+ NMIK + + + P++V ++ +++ NFLGEK R+ K+
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPISVK-VQGDEVI-IENFLGEKAPRKAKIL 125
Query: 400 PGVTV 414
PGVTV
Sbjct: 126 PGVTV 130
Score = 47.6 bits (108), Expect = 2e-04
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQ-KGKDGTWCDCR*LSKQ 431
KGVT+GF YK++ VY+HFPI+ V +G+ + K G R
Sbjct: 80 KGVTEGFTYKLKVVYSHFPIS-VKVQGDEVIIENFLGEKAPRKAKILPGVTVKVR----- 133
Query: 432 KDELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEK 563
E+I+EG E V +AA I+Q+T R DG+Y EK
Sbjct: 134 GQEIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 66.9 bits (156), Expect = 4e-10
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 195
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 196 GSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEK 375
KK+LA + T+ SH+ NMI P+ +S L RNFLGEK
Sbjct: 61 AGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEK 120
Query: 376 YIRRVKMAPGVTVVNSQNKR 435
IR++ M GV + ++ K+
Sbjct: 121 RIRKIYMGQGVKIKKNEAKK 140
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/98 (35%), Positives = 52/98 (53%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQKD 437
GV+ GF+Y ++ +YAHFPIN T+ S +K G + +KD
Sbjct: 82 GVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKD 141
Query: 438 ELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLY 551
E+ + G+ L VS +AA IQQS ++ + RK LDG+Y
Sbjct: 142 EISVFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGIY 179
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/133 (27%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 195
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 196 GSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEK 375
+++ A + ++ +H++NMI + R L ++++ +S ++ N +GEK
Sbjct: 63 ADRRKKALLYSIIAHIKNMITG--TINGYRYYLKVISTHFPISVKVSGDEVQVSNLIGEK 120
Query: 376 YIRRVKMAPGVTV 414
IRR K+ PGV V
Sbjct: 121 NIRRAKILPGVKV 133
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 60.5 bits (140), Expect = 3e-08
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWF 195
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 196 GSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEK 375
+KK+ A V T+ S + NMI K + + P+++ + + NFLGE+
Sbjct: 60 ATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMSLKVEK--DKIIIENFLGER 117
Query: 376 YIRRVKMAPGVTV 414
R + PG V
Sbjct: 118 GKRIAGIMPGAKV 130
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 59.7 bits (138), Expect = 5e-08
Identities = 37/106 (34%), Positives = 53/106 (50%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQK 434
K VT GF Y M+AVY HF IN E ++ + R L ++K
Sbjct: 99 KAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMRGAARVR-LDERK 157
Query: 435 DELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEKTLV 572
D ++IEG SL DVS SA I ++ R SR LDG++ +E+ ++
Sbjct: 158 DTIVIEGPSLSDVSQSAGTITNECKAKNRDSRVFLDGIFVTERGIM 203
Score = 46.0 bits (104), Expect = 7e-04
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Frame = +1
Query: 4 KQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLL 177
K P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 178 KVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYR 357
++ W G +K +A TV S + N IK + + ++L +
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVK 132
Query: 358 NFLGEKYIRRVKMAPGVTVVNSQNK 432
NFLGEK ++R +M V + K
Sbjct: 133 NFLGEKNVKRFRMRGAARVRLDERK 157
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 59.3 bits (137), Expect = 7e-08
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 192
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 193 FGSKKELAAVRTVCSHVENMIK 258
+ K LA T+ SHV+NMIK
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIK 75
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 57.2 bits (132), Expect = 3e-07
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKL-SVNDNKIILETYFA 59
Query: 199 SKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEK- 375
+++E + T SH++NM++ R +C P+ V L +L+ NFLGEK
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRVK-LEGNKLI-VENFLGEKA 117
Query: 376 -YIRRVKMAPGVTVVNSQNK 432
I+ + V V QNK
Sbjct: 118 PIIKELPYLDKVKVKIEQNK 137
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 56.0 bits (129), Expect = 7e-07
Identities = 38/102 (37%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQ--KGKDGT--WCDCR*LS 425
GVT G++YKM VY+HFPI +E H+ +G W + S
Sbjct: 89 GVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSN---ES 145
Query: 426 KQKDELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLY 551
KDE+ IEG +LEDVS I Q T + + RK LDG+Y
Sbjct: 146 VAKDEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKFLDGIY 187
Score = 38.7 bits (86), Expect = 0.11
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 180
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 181 VEKWFGSKKELAAVRTVCSHVENMI 255
WFG++K LA + T+ V+NMI
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMI 87
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 53.2 bits (122), Expect = 5e-06
Identities = 39/125 (31%), Positives = 62/125 (49%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 220 VRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEKYIRRVKMA 399
T+ +H +NMI+ R + P+ + + L NFLGEK R K+
Sbjct: 64 TGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQLK--QQGNRLEITNFLGEKQPRIAKII 121
Query: 400 PGVTV 414
GVTV
Sbjct: 122 EGVTV 126
Score = 41.9 bits (94), Expect = 0.012
Identities = 29/103 (28%), Positives = 50/103 (48%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQK 434
+GV G++Y+M+ VY+HFPI + +GN ++ + + +
Sbjct: 76 RGVADGYEYRMKVVYSHFPIQ-LKQQGN----RLEITNFLGEKQPRIAKIIEGVTVKIGN 130
Query: 435 DELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEK 563
DE+ I G E V ++AA I+ +T R R DG+Y +E+
Sbjct: 131 DEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 47.2 bits (107), Expect = 3e-04
Identities = 35/129 (27%), Positives = 63/129 (48%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 225
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 226 TVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEKYIRRVKMAPG 405
T SH++N+I + + + P+ V + L NFLGEK R K+
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQVKVEG--KTLVIGNFLGEKKPRIAKILGE 125
Query: 406 VTVVNSQNK 432
V S N+
Sbjct: 126 TKVKVSGNE 134
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/99 (27%), Positives = 45/99 (45%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQK 434
+GV GF+YK++AVY+HFP+ + GN + + + K
Sbjct: 80 RGVDSGFEYKLKAVYSHFPMT-IRVNGNQMTVTNLFGEKVPRVAALPWSPAEVEVKVQNK 138
Query: 435 DELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLY 551
++ + G E V +AA I++S + R R DG+Y
Sbjct: 139 TDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIY 177
Score = 37.9 bits (84), Expect = 0.19
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +1
Query: 43 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 222
K+ +P+G+T V VTV L R F+H +++R + L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGE-LEVFVNLPRKKEKALA 68
Query: 223 RTVCSHVENMIK 258
T +H+ NM +
Sbjct: 69 GTWAAHLTNMAR 80
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 46.8 bits (106), Expect = 4e-04
Identities = 34/103 (33%), Positives = 50/103 (48%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQK 434
+GV G+ K++ VYAHFPI K GT + +SK +
Sbjct: 64 EGVGVGYTIKLKVVYAHFPITIKQDGAMILVENFQGERSARKAKIVGGT----KVVSKGE 119
Query: 435 DELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEK 563
D +I+ G+ L DVS +AA ++Q T + + R LDG+Y EK
Sbjct: 120 D-VIVTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 46.4 bits (105), Expect = 5e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 192
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 193 FGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGE 372
+ +K A VRT+ S + NMI K + P++V ++ L N G
Sbjct: 61 YNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGL 120
Query: 373 KYIRRVKMAPGVTV-VNSQNKR 435
K I + V V N+ NK+
Sbjct: 121 KRIDSFFIPSSVQVCTNNLNKK 142
Score = 36.7 bits (81), Expect = 0.43
Identities = 24/102 (23%), Positives = 44/102 (43%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQKD 437
GV+KGF Y ++ VY+HFPI+ + + + + K
Sbjct: 83 GVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKK 142
Query: 438 ELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEK 563
E+I+ +E + ++LIQ + + R +DG+Y + K
Sbjct: 143 EIILLSKDIETLGILSSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 42.3 bits (95), Expect = 0.009
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +3
Query: 222 EDSLFTCREHDKGVTKGFQYKMRAVYAHFPINCVTTEGNS 341
++ L +C EHD+G GF Y+MR+VYA FP N + E S
Sbjct: 20 QNHLQSCSEHDQG---GFHYRMRSVYAGFPTNVIIQENGS 56
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 42.3 bits (95), Expect = 0.009
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 195
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 196 GSKKELAAVR-TVCSHVENMIK 258
+K L A+R T SHV NMIK
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIK 86
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 42.3 bits (95), Expect = 0.009
Identities = 27/98 (27%), Positives = 45/98 (45%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQKD 437
GV +GF+Y ++ VYAHFPI V EGN + G +
Sbjct: 99 GVKEGFEYHLKVVYAHFPIK-VRVEGNEVIIENFIGEKHPRRAKIVGR----AQVEISGQ 153
Query: 438 ELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLY 551
++ + G +E+ +AA ++Q+T + + R DG+Y
Sbjct: 154 DIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGIY 191
Score = 34.3 bits (75), Expect = 2.3
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Frame = +1
Query: 25 QIVANQKVKIPDGLTVHVKS---RLVTVK--GPRGVLKRNFKHLAVDIRMVNPRLLKVEK 189
++ + V++P+ + + ++ R T+K GP+G R K+ V I + + ++ +V
Sbjct: 17 EVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFIEVGDGKV-RVYT 75
Query: 190 WFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLG 369
KK A V T H+EN+I + + P+ V + +++ NF+G
Sbjct: 76 TSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIKVR-VEGNEVI-IENFIG 133
Query: 370 EKYIRRVKM 396
EK+ RR K+
Sbjct: 134 EKHPRRAKI 142
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 41.9 bits (94), Expect = 0.012
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFP--INCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSK 428
KGVT+G +YK++ VY+HFP + EG + D + +
Sbjct: 97 KGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTE---VIV 153
Query: 429 QKDELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLYGSEK 563
Q ++I+ G E V +AA ++Q+T + R R DG+Y EK
Sbjct: 154 QGQDIIVRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIYIVEK 198
Score = 34.7 bits (76), Expect = 1.8
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Frame = +1
Query: 28 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 192
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 193 FGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGE 372
++++ A + + +++ENM K + + L P V + + NF+GE
Sbjct: 76 RSNRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGE 135
Query: 373 KYIR 384
R
Sbjct: 136 NVPR 139
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 41.5 bits (93), Expect = 0.015
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRL 174
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL 54
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 41.1 bits (92), Expect = 0.020
Identities = 29/99 (29%), Positives = 48/99 (48%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKGKDGTWCDCR*LSKQK 434
KG+ +GFQY+M+ Y+HFP+ V+ +G + G +S +
Sbjct: 79 KGLKEGFQYEMKIDYSHFPMR-VSVKGKTVVIENFFGERSPRTAEIVGE----TQVSVKG 133
Query: 435 DELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLY 551
D L + G S +DV +AA I+++T + R DG+Y
Sbjct: 134 DRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIY 172
>UniRef50_UPI00015B4F87 Cluster: PREDICTED: similar to
prophenoloxidase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to prophenoloxidase - Nasonia
vitripennis
Length = 994
Score = 39.9 bits (89), Expect = 0.047
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 320 TVNGEVSIHSTHLVLEAFSYSFIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFT-MRMST 144
T G V HL + FSYSF++ +T Q V F+ P + T R F R+
Sbjct: 773 TPRGSVLARLQHLNHDEFSYSFVVNNTNNQEVTGTVRVFIAPKYDETGRALSFNDQRLLM 832
Query: 143 AKCLKFLLRTPRGPLTVTR 87
+ KF R RG TV R
Sbjct: 833 IEMDKFTTRLRRGQNTVNR 851
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 39.9 bits (89), Expect = 0.047
Identities = 28/125 (22%), Positives = 62/125 (49%)
Frame = +1
Query: 43 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 222
+V+IP+G+TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 223 RTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNFLGEKYIRRVKMAP 402
T S + N+ + ++ + + P+TV + ++L NF GE+ R +
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPITVK-VEGKKIL-IENFQGERAPRSTHIMG 128
Query: 403 GVTVV 417
V+
Sbjct: 129 NTKVI 133
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 39.5 bits (88), Expect = 0.062
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQKG-KDGTWCDCR*LSKQK 434
GVT+G++YK++ +Y HFP+ V +GN G + K K
Sbjct: 85 GVTRGWRYKLKVIYTHFPM-LVKVQGNQLVIENFLGRKSKITLNIPKGVKVEV----KGK 139
Query: 435 DELIIEGNSLEDVSSSAALIQQST 506
++++IEG E VS+ AA +Q +T
Sbjct: 140 EDIVIEGIDRELVSTFAAAVQAAT 163
Score = 37.9 bits (84), Expect = 0.19
Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 183
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 184 EKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLRYRNF 363
E + K+E A + T ++NM + + + P+ V ++ QL+ NF
Sbjct: 60 EVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPMLVK-VQGNQLV-IENF 117
Query: 364 LGEKYIRRVKMAPGVTV 414
LG K + + GV V
Sbjct: 118 LGRKSKITLNIPKGVKV 134
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 39.1 bits (87), Expect = 0.081
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 210
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 211 LAAVRTVCSHVENMI 255
A T S + NM+
Sbjct: 62 RALHGTTRSLINNMV 76
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 38.7 bits (86), Expect = 0.11
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 207
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 208 ELAAVRTVCSHVENMIK 258
A T + V NM++
Sbjct: 63 TRAMAGTTRALVNNMVQ 79
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 38.7 bits (86), Expect = 0.11
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSXXXXXXXXXXXXHQ-KGKDGTWCDCR*LSKQ 431
+GVTKGF+Y M+ + HFP+ V+ G+ K DG C+ +S +
Sbjct: 79 EGVTKGFEYHMKIDFTHFPMR-VSVRGDKLIVENFLGEKSPRSAKIVDG----CK-VSVK 132
Query: 432 KDELIIEGNSLEDVSSSAALIQQSTTSRIRISRKVLDGLY 551
D + I G + +AA I+++T R +R DG++
Sbjct: 133 GDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIF 172
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 38.3 bits (85), Expect = 0.14
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
Frame = +1
Query: 85 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 237
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 238 HVENMIK 258
++NMI+
Sbjct: 113 QIKNMIR 119
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 135
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 37.1 bits (82), Expect = 0.33
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 132
+A + + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.57
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 138
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2;
Clostridium|Rep: Signal peptidase I precursor -
Clostridium cellulolyticum H10
Length = 189
Score = 34.7 bits (76), Expect = 1.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 280 YWKPLVTPLSCSLHVNRLSSRRQAPFWIRTISQPSGDE 167
+W ++ PL ++ V+R S Q FW++ + +GDE
Sbjct: 80 FWDNVIDPLKYNILVSRFSDNNQQVFWVKRVIGKAGDE 117
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 123
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 34.7 bits (76), Expect = 1.8
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL 174
VA +KIP G+ V+V + +TVKG G L R H AV + + L
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAEL 51
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 2.3
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 138
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p -
Drosophila melanogaster (Fruit fly)
Length = 730
Score = 33.9 bits (74), Expect = 3.1
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +1
Query: 178 KVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLR 351
++E+ G++ E A+++ H+E +KE +K + C+ L SP+ + R+ QLL+
Sbjct: 316 RLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRS-RIEQLLK 372
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 33.9 bits (74), Expect = 3.1
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 251 MFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRRDF 78
+F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R F
Sbjct: 24 LFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLRCF 83
Query: 77 T 75
+
Sbjct: 84 S 84
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.5 bits (73), Expect = 4.0
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ IP G+TV +K +VTVKGP+G L +
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 33.5 bits (73), Expect = 4.0
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 207
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 208 ELAAVRTVCSHVENMIK 258
A T S + NM++
Sbjct: 62 HRALHGTTRSLLGNMVE 78
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 5.3
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 32.7 bits (71), Expect = 7.1
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 159
+ N+ + +P G+ + +VTVKGP+G L R F ++IR+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIRV 45
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.7 bits (71), Expect = 7.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
>UniRef50_A6S819 Cluster: Citrate synthase; n=1; Botryotinia
fuckeliana B05.10|Rep: Citrate synthase - Botryotinia
fuckeliana B05.10
Length = 534
Score = 32.3 bits (70), Expect = 9.3
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 338 ITLSGDTVNGEVSIHSTHLVLEAFSYSFIMFS 243
+ L GD G VS H+THLV A S F+ +S
Sbjct: 297 LALHGDHEGGNVSAHTTHLVGSALSDPFLSYS 328
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 9.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 132
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 32.3 bits (70), Expect = 9.3
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 210
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 211 LAAVRTVCSHVENMIK 258
A + V N +K
Sbjct: 62 RALHGLTRTLVANAVK 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,343,191
Number of Sequences: 1657284
Number of extensions: 11447118
Number of successful extensions: 26605
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 25890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26553
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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