Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1167
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498FCA Cluster: hypothetical protein 75.t00022; ...    37   0.29 
UniRef50_Q2ANW9 Cluster: Cyclic peptide transporter precursor; n...    33   4.7  

>UniRef50_UPI0000498FCA Cluster: hypothetical protein 75.t00022;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 75.t00022 - Entamoeba histolytica HM-1:IMSS
          Length = 1687

 Score = 36.7 bits (81), Expect = 0.29
 Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -3

Query: 272 SHAFFTLRHVILRYI--SLFWPNSKLKSKYWTEKCALMSVTIL 150
           SH+F ++R++ILR+I    +WPN  L+ +Y  E    MS T+L
Sbjct: 427 SHSFLSIRNIILRHIFDIRWWPNDSLRVEYIKELQESMSHTVL 469


>UniRef50_Q2ANW9 Cluster: Cyclic peptide transporter precursor; n=4;
           cellular organisms|Rep: Cyclic peptide transporter
           precursor - Bacillus weihenstephanensis KBAB4
          Length = 1055

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = -2

Query: 366 VFPLHTLLK--PDEIVFIRN-FLNLVTGFVVNASLTRIFYSSSRNLAIYF 226
           VFPLH      P  ++ + + F N +  F++N +LTR  YSS+ +L +YF
Sbjct: 504 VFPLHNKKNFFPIFVLSVTSGFGNAMIIFIINEALTRSNYSSNNSLFLYF 553


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,738,465
Number of Sequences: 1657284
Number of extensions: 7979266
Number of successful extensions: 16365
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16363
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)