Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1166
         (518 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39851-12|AAV58884.1|  137|Caenorhabditis elegans Hypothetical p...    71   7e-13
U39851-11|AAV58883.1|  171|Caenorhabditis elegans Hypothetical p...    71   7e-13
U39851-10|AAM22035.1|  144|Caenorhabditis elegans Hypothetical p...    71   7e-13
AF043693-2|AAB97535.2|  351|Caenorhabditis elegans Hypothetical ...    28   3.5  
AF039720-6|AAB96700.1|  347|Caenorhabditis elegans Hypothetical ...    28   3.5  
Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U58732-5|AAW88398.1|  337|Caenorhabditis elegans Serpentine rece...    28   4.6  
AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical ...    28   4.6  
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    28   4.6  
Z35663-16|CAA84726.2|  462|Caenorhabditis elegans Hypothetical p...    27   6.1  
Z82060-2|CAB04882.1|  421|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AF016435-4|AAB65880.2|  330|Caenorhabditis elegans Serpentine re...    23   9.3  

>U39851-12|AAV58884.1|  137|Caenorhabditis elegans Hypothetical
           protein C23G10.2c protein.
          Length = 137

 Score = 70.5 bits (165), Expect = 7e-13
 Identities = 38/87 (43%), Positives = 51/87 (58%)
 Frame = +2

Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEAG 433
           I+S      +GPYSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A 
Sbjct: 10  ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAA 69

Query: 434 GASLESAVKTTGLVASMDDXQTFNKVY 514
           GA   + VKTT L+ ++ D    N+VY
Sbjct: 70  GADYGNVVKTTVLLQNIADFAAVNEVY 96


>U39851-11|AAV58883.1|  171|Caenorhabditis elegans Hypothetical
           protein C23G10.2a protein.
          Length = 171

 Score = 70.5 bits (165), Expect = 7e-13
 Identities = 38/87 (43%), Positives = 51/87 (58%)
 Frame = +2

Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEAG 433
           I+S      +GPYSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A 
Sbjct: 44  ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAA 103

Query: 434 GASLESAVKTTGLVASMDDXQTFNKVY 514
           GA   + VKTT L+ ++ D    N+VY
Sbjct: 104 GADYGNVVKTTVLLQNIADFAAVNEVY 130


>U39851-10|AAM22035.1|  144|Caenorhabditis elegans Hypothetical
           protein C23G10.2b protein.
          Length = 144

 Score = 70.5 bits (165), Expect = 7e-13
 Identities = 38/87 (43%), Positives = 51/87 (58%)
 Frame = +2

Query: 254 ITSPEIYQPVGPYSQAILADKTLYISGILGLDRDAQMVCGGAEAQTRQALDNLRHVLEAG 433
           I+S      +GPYSQA+ A  T+Y+SG LGLD     +  G   QT Q+L NL  VL+A 
Sbjct: 17  ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAA 76

Query: 434 GASLESAVKTTGLVASMDDXQTFNKVY 514
           GA   + VKTT L+ ++ D    N+VY
Sbjct: 77  GADYGNVVKTTVLLQNIADFAAVNEVY 103


>AF043693-2|AAB97535.2|  351|Caenorhabditis elegans Hypothetical
           protein C34B2.3 protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 95  TDSVIFLSFELLTYLHLKNKNELRRFC 175
           T+++  L FEL   L ++ KN+ ++FC
Sbjct: 78  TEAIKMLQFELFVLLTVEKKNQCKQFC 104


>AF039720-6|AAB96700.1|  347|Caenorhabditis elegans Hypothetical
           protein F33D11.7 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 95  TDSVIFLSFELLTYLHLKNKNELRRFC 175
           T+++  L FEL   L ++ KN+ ++FC
Sbjct: 77  TEAIKMLQFELFVLLTVEKKNQCKQFC 103


>Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = -3

Query: 498 VXKSSMLATKPVVFTADSNEAPPASSTCRRLSRA*RVCASAPPQ----TICASRSNPR 337
           V KS+ +  +PV FT DS    P + +  +L+R+     +AP Q      CA    PR
Sbjct: 650 VNKSTAVPGQPVFFTRDSPSRVPHARSSSKLNRSSYPSRNAPHQLEDGCCCAHARAPR 707


>U58732-5|AAW88398.1|  337|Caenorhabditis elegans Serpentine
           receptor, class v protein5, isoform b protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -2

Query: 466 SSFHGRLQRSATSFKYMSQIVQSLTGLRFSTTADHLCISIQSENSRNV 323
           + FHG + R  + F Y  +IV  +  L F+       ++I S NS N+
Sbjct: 77  TEFHGIIPRIVSGFHYYIKIVVYIGYLTFALNRLTSALNISSYNSVNI 124


>AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = -3

Query: 498 VXKSSMLATKPVVFTADSNEAPPASSTCRRLSRA*RVCASAPPQ----TICASRSNPR 337
           V KS+ +  +PV FT DS    P + +  +L+R+     +AP Q      CA    PR
Sbjct: 650 VNKSTAVPGQPVFFTRDSPSRVPHARSSSKLNRSSYPSRNAPHQLEDGCCCAHARAPR 707


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 297 KQF*RTRPYTFLEFSDWIEMHRWSAVVLKRRPVRLWT 407
           KQF    P +  EF+D  E H    +V+K  P  LWT
Sbjct: 592 KQFDFPAPKSDFEFNDNGEFHEGDVIVVKHSP-NLWT 627


>Z35663-16|CAA84726.2|  462|Caenorhabditis elegans Hypothetical
           protein T04A8.3 protein.
          Length = 462

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 258 VILFLLLYCYSNFLLNSFWAKLCLRTPVQNLLSSFLFFR 142
           + + L L CY+N  ++  W+   +R  V N  SSFL  R
Sbjct: 5   IFMGLCLLCYTNAQVDRDWSFQQIRWKVTNARSSFLRHR 43


>Z82060-2|CAB04882.1|  421|Caenorhabditis elegans Hypothetical
           protein T27F6.2 protein.
          Length = 421

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 474 TKPVVFTADSNEAPPASSTCRRLSRA*RVCASAPPQTICASRSNP 340
           + P  F   +N   P    C+R  +A   C++APP T+  S +NP
Sbjct: 264 SSPAGFWFSTNCNNPGYYICKR--QAGVQCSAAPPATVTPSPANP 306


>AF016435-4|AAB65880.2|  330|Caenorhabditis elegans Serpentine
           receptor, class w protein8 protein.
          Length = 330

 Score = 23.4 bits (48), Expect(2) = 9.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 460 FHGRLQRSATSFKYMSQIVQSLTGL 386
           FH  +   AT+F+Y+S+   S+ GL
Sbjct: 115 FHVMIDVLATTFQYLSRRCASILGL 139



 Score = 21.8 bits (44), Expect(2) = 9.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 301 CLTVRTYWLIYFRRCYIVF 245
           C ++   +L+ FR C I+F
Sbjct: 133 CASILGLFLVVFRTCSIIF 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,587,189
Number of Sequences: 27780
Number of extensions: 247464
Number of successful extensions: 714
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)