Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1163
         (299 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0070 + 27479654-27479672,27479864-27479922,27480339-274803...   115   6e-27
01_06_0260 - 27959188-27959251,27959342-27959424,27960220-279603...   114   1e-26
07_01_0697 + 5265079-5266281                                           30   0.29 
05_01_0199 + 1434040-1434414,1434808-1435127,1435889-1435928           28   1.2  
07_01_0385 - 2871628-2872131                                           28   1.6  
12_02_0648 + 21490202-21490296,21490547-21490634,21491216-214912...    27   2.1  
09_06_0303 - 22149214-22149474,22150099-22150236,22150856-221511...    26   4.7  
07_03_0039 - 12718972-12720699                                         26   6.3  

>05_07_0070 +
           27479654-27479672,27479864-27479922,27480339-27480378,
           27480477-27480565,27481065-27481147,27481219-27481282
          Length = 117

 Score =  115 bits (277), Expect = 6e-27
 Identities = 49/77 (63%), Positives = 59/77 (76%)
 Frame = +2

Query: 23  KMAXRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKR 202
           ++  RTKK GI GKYGTRYGASLRK +KKMEV+QH+KY C FCGK A+KR  VGIW CK 
Sbjct: 25  ELTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKD 84

Query: 203 CKRTVAGGAWVFSTTAA 253
           C +  AGGA+  +T +A
Sbjct: 85  CGKVKAGGAYTMNTASA 101


>01_06_0260 -
           27959188-27959251,27959342-27959424,27960220-27960308,
           27960388-27960427,27960938-27960981,27961240-27961288
          Length = 122

 Score =  114 bits (275), Expect = 1e-26
 Identities = 49/73 (67%), Positives = 57/73 (78%)
 Frame = +2

Query: 35  RTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRT 214
           RTKK GI GKYGTRYGASLRK +KKMEV+QH+KY C FCGK A+KR  VGIW CK C + 
Sbjct: 34  RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKV 93

Query: 215 VAGGAWVFSTTAA 253
            AGGA+  +T +A
Sbjct: 94  KAGGAYTMNTASA 106


>07_01_0697 + 5265079-5266281
          Length = 400

 Score = 30.3 bits (65), Expect = 0.29
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 158 DAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAAYH 259
           DA++R C G W   +C R   GG   F   A YH
Sbjct: 19  DALQRFC-GAWRDMQCSRRGGGGGDAFVVGAVYH 51


>05_01_0199 + 1434040-1434414,1434808-1435127,1435889-1435928
          Length = 244

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = +1

Query: 199 AMQEDCSR--RSLGILHYCCLSCRSAV-RRLRE 288
           A  EDC R   + GIL Y C SCR+ V  ++RE
Sbjct: 145 AQDEDCFRWNNAAGILCYGCESCRAGVMEKVRE 177


>07_01_0385 - 2871628-2872131
          Length = 167

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 134 YTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAW 232
           + C FC K   K   +G       K  VAGG+W
Sbjct: 47  FPCLFCAKTFRKSQALGGHQNAHRKERVAGGSW 79


>12_02_0648 +
           21490202-21490296,21490547-21490634,21491216-21491260,
           21491355-21491387,21491480-21491557,21491647-21491690,
           21491765-21491805,21492102-21492184,21492261-21492352,
           21492468-21492537,21492838-21492876,21493670-21493687,
           21494586-21494713,21495235-21495358,21495585-21495716,
           21496092-21496223,21496582-21496665
          Length = 441

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 113 EVTQHAKYTCSFCGKDAM 166
           E+ +H KYTC  C K A+
Sbjct: 194 EMVEHNKYTCPICSKTAL 211


>09_06_0303 -
           22149214-22149474,22150099-22150236,22150856-22151100,
           22151344-22151809
          Length = 369

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
 Frame = +2

Query: 5   VSERFTKMAXRTKKVG-ITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCV 181
           +  RF       ++V     K G  Y   L K          AKYT    G  A  RS  
Sbjct: 63  MKSRFEAFKANARQVNEFNKKEGMSYTLGLNKFSDMSYEEFAAKYTGGMPGSIADDRSSA 122

Query: 182 GIWSCKRCKRTV 217
           G  SCK  ++ V
Sbjct: 123 GAVSCKLREKNV 134


>07_03_0039 - 12718972-12720699
          Length = 575

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -3

Query: 240 ENTQAPPATVLLHRLQDQMPTQERFIASLPQNEQVYFACWVTSIFLTILRR 88
           EN  A     +LH  +D +  QERF   L +  +    C + S+F  IL +
Sbjct: 416 ENKIATKIIAVLHSNRDTL--QERFDCLLERGLEYKMLCQIVSVFPKILNQ 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,637,089
Number of Sequences: 37544
Number of extensions: 172285
Number of successful extensions: 428
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)