Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1161
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   3.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 179 VRDYFPELCSDLIPALTRLDVDDFPHDCTKNLEPPESNIK 60
           V D  P LC+ LI +   L  D        NL+  + N+K
Sbjct: 41  VEDIDPTLCTHLIYSFVGLGDDSRIKHLEPNLDVNQGNLK 80


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 542 WYWGTLLIFQNPVKSIP 592
           WY  T+L  QNP  ++P
Sbjct: 386 WYMNTVLGHQNPYLALP 402


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 542 WYWGTLLIFQNPVKSIP 592
           WY  T+L  QNP  ++P
Sbjct: 278 WYMNTVLGHQNPYLALP 294


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
 Frame = +3

Query: 141  NQIGAKFWEVISDEHGIDATGAYSGD-----SDLQLERINVYYTKLQGASTSREL*WWTL 305
            N+I  + W V  D  G     AY GD      D++  R    Y K +G   +     WT+
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKAEYIKTKGFGGAVA---WTI 967

Query: 306  SLEPWT 323
             L+ ++
Sbjct: 968  DLDDFS 973


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 461 NYIQYRNQPVQPPLCNVLSPSYSPPQTVR 375
           N ++  NQ  +P +C +   SY+ P T++
Sbjct: 240 NLLEEDNQ--KPNVCRICGKSYARPSTLK 266


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 23   FFFYMIKFSKV 55
            +FFY++KF KV
Sbjct: 1028 YFFYLVKFYKV 1038


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 23  FFFYMIKFSKV 55
           +FFY++KF KV
Sbjct: 309 YFFYLVKFYKV 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,231
Number of Sequences: 336
Number of extensions: 3304
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)