Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1161
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 138 2e-33
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 138 3e-33
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 135 3e-32
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 131 4e-31
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 111 5e-25
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 5e-24
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 80 1e-15
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 80 1e-15
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 79 2e-15
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 79 3e-15
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 51 8e-07
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 50 1e-06
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 48 6e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 47 1e-05
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 47 1e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 41 7e-04
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.40
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 2.2
SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29) 27 8.7
SB_235| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=3.9e-15) 27 8.7
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 138 bits (335), Expect = 2e-33
Identities = 65/82 (79%), Positives = 71/82 (86%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 266 EATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 325
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
VDS ++ ++ LQGF
Sbjct: 326 VDSVLDVV-RKEAESCDCLQGF 346
Score = 114 bits (275), Expect = 4e-26
Identities = 73/140 (52%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQGAS-T 278
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYY + G
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 273
Query: 279 SREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T SV G G K G + VL
Sbjct: 274 PRAV---LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 330
Query: 453 DVVRKEAERLRLXCRGFQAT 512
DVVRKEAE +GFQ T
Sbjct: 331 DVVRKEAESCD-CLQGFQLT 349
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 138 bits (334), Expect = 3e-33
Identities = 64/82 (78%), Positives = 71/82 (86%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
VDS ++ ++ LQGF
Sbjct: 113 VDSVLDVV-RKEAESCDCLQGF 133
Score = 115 bits (276), Expect = 3e-26
Identities = 73/140 (52%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQGAS-T 278
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYY + G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 279 SREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T SV G G K G + VL
Sbjct: 61 PRAI---LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 117
Query: 453 DVVRKEAERLRLXCRGFQAT 512
DVVRKEAE +GFQ T
Sbjct: 118 DVVRKEAESCD-CLQGFQLT 136
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 135 bits (326), Expect = 3e-32
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+GGKYVPR+V++DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+DS ++ ++ +QGF
Sbjct: 113 MDSVLDVV-RKEAESCDCIQGF 133
Score = 113 bits (272), Expect = 1e-25
Identities = 72/140 (51%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQGAS-T 278
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYY + G
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 279 SREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T SV G G K G + VL
Sbjct: 61 PRSV---LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVL 117
Query: 453 DVVRKEAERLRLXCRGFQAT 512
DVVRKEAE +GFQ T
Sbjct: 118 DVVRKEAESCD-CIQGFQLT 136
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 131 bits (317), Expect = 4e-31
Identities = 61/78 (78%), Positives = 67/78 (85%)
Frame = +2
Query: 269 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSG 448
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 449 TGCS*KRSRKAAIXLQGF 502
++ ++ +QGF
Sbjct: 62 LDVV-RKEAESCDCIQGF 78
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 111 bits (266), Expect = 5e-25
Identities = 45/61 (73%), Positives = 55/61 (90%)
Frame = +2
Query: 263 SGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 442
+GG+YVPR+++VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 443 S 445
+
Sbjct: 71 N 71
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 107 bits (258), Expect = 5e-24
Identities = 48/56 (85%), Positives = 49/56 (87%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQG 269
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLERINVYY + G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATG 56
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/40 (92%), Positives = 40/40 (100%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 376
EA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 53 EATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 80.2 bits (189), Expect = 1e-15
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEI 114
Query: 437 VD 442
VD
Sbjct: 115 VD 116
Score = 79.8 bits (188), Expect = 2e-15
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 488 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEI 547
Query: 437 VD 442
VD
Sbjct: 548 VD 549
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
MRE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 475
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL
Sbjct: 640 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 699
Query: 437 VD 442
+D
Sbjct: 700 ID 701
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 119 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 178
Query: 437 VD 442
VD
Sbjct: 179 VD 180
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 99 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
+ RE + + GQ G QIG WE+ EHGI G D +
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 106
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
+RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 627
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSV 328
E GK+VPRAV VDLEP + +
Sbjct: 567 ETGAGKHVPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 79.4 bits (187), Expect = 2e-15
Identities = 32/62 (51%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 54 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEI 113
Query: 437 VD 442
+D
Sbjct: 114 ID 115
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 41
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 79.0 bits (186), Expect = 3e-15
Identities = 32/62 (51%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 437 VD 442
+D
Sbjct: 115 ID 116
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
MRE + I GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 78.6 bits (185), Expect = 4e-15
Identities = 32/62 (51%), Positives = 46/62 (74%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+ GKYVPRAV+VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+
Sbjct: 966 EAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEM 1025
Query: 437 VD 442
V+
Sbjct: 1026 VE 1027
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 77.8 bits (183), Expect = 6e-15
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 426 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQ 485
Query: 437 VD 442
+D
Sbjct: 486 ID 487
Score = 77.8 bits (183), Expect = 6e-15
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 859 ETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEM 918
Query: 437 VD 442
+D
Sbjct: 919 ID 920
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 846
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 77.8 bits (183), Expect = 6e-15
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEM 114
Query: 437 VDS 445
+D+
Sbjct: 115 IDT 117
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
MRE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/63 (47%), Positives = 44/63 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G +
Sbjct: 473 ETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDH 532
Query: 437 VDS 445
+D+
Sbjct: 533 IDN 535
Score = 75.4 bits (177), Expect = 3e-14
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L
Sbjct: 40 ETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQL 99
Query: 437 VD 442
++
Sbjct: 100 IE 101
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE V I GQ G Q+G WE+ EHGI G D +
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 460
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E
Sbjct: 20 ETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEH 79
Query: 437 VD 442
+D
Sbjct: 80 ID 81
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 320 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 442
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELID 53
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 50.8 bits (116), Expect = 8e-07
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 326 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 442
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELID 41
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 50.8 bits (116), Expect = 8e-07
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 326 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 442
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELID 41
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP + P+ + G+ A NN+A+GHYT G +
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQ 104
Query: 437 VD 442
VD
Sbjct: 105 VD 106
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 380 QSGAGNNWAKGHYTEGAELVDSGTGCS*KRSRKAAIXLQGF 502
Q+ A NNWAKG YTEGAEL+DSG C K + +QGF
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCD-TVQGF 41
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 326 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 442
VR G + +F PD + G+ A NN+A+GHYT G E +D
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHID 41
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 326 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 442
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHID 41
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 284 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 403
RAV++D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +3
Query: 159 FWEVISDEHGIDATGAYSG-DSDLQLERINVYY 254
FWEVI++EHGID G + S +Q +R+NVY+
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYF 33
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQ--LERINVYYTKLQG 269
MRE + + GQ G QIG WE+ EHGI G D + + N ++++ G
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGG 58
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVR 331
E GGK+VPRAV VDLEP + ++
Sbjct: 55 ETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSD 234
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 31.9 bits (69), Expect = 0.40
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 111 IVHIQAGQCGNQIGAKFWEVISDE 182
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +2
Query: 284 RAVMVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 442
RAV +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2
Query: 390 APDCPKTKLSGRKICPNGPERTESMVPGSRSTITAR----GTYLP 268
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 904
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -3
Query: 434 VQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRS-PWFQAQGPPSQLAGRTCPLKL 258
V PP+C+ L S P S A+ A++G + W + + P +QL +L
Sbjct: 193 VHPPICDCLGCRISSPVVASPESIREAFEAENAKDGNADDWGEVKTPTNQLPESELKSEL 252
Query: 257 -RIVDID 240
R+ D D
Sbjct: 253 GRLQDTD 259
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 381 CPKTKLSGRKICPNGPERTESMVPGSRSTITARGTYLPPEA 259
CP+ + RK P+G + + G+ S + ++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 336 PERTESMVPGSRSTITARGT--YLPPEASYSRH 244
PE+++S G R TI RGT PP + +RH
Sbjct: 1359 PEKSDSHSSGERYTIEHRGTDPVPPPRSDLTRH 1391
>SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29)
Length = 190
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 180 EHGIDATGAYSGDSDLQLERINVYYTK 260
+HG+ TG + GDSD +L+ Y+K
Sbjct: 137 DHGMTRTGDHGGDSDDELDAALFVYSK 163
>SB_235| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=3.9e-15)
Length = 544
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 482 AIXLQGFSSYSILLGRRYWIWY-WGTLLIFQNP 577
+I L G++SY + + ++W W+ W + +Q P
Sbjct: 229 SIPLDGYTSYKLQITPQWWTWWIWAGVFGWQLP 261
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,717,944
Number of Sequences: 59808
Number of extensions: 417769
Number of successful extensions: 1229
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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