Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1161
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 136 1e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 134 3e-32
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 134 6e-32
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 134 6e-32
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 130 7e-31
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 130 7e-31
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 91 5e-19
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 91 5e-19
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 78 4e-15
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 77 7e-15
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 77 7e-15
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 77 7e-15
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 77 7e-15
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 77 1e-14
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 77 1e-14
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 77 1e-14
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 77 1e-14
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 77 1e-14
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 76 2e-14
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 69 2e-12
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 69 2e-12
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 59 2e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 59 2e-09
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 31 0.82
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 31 0.82
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 28 4.4
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 28 4.4
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 28 4.4
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 28 5.8
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 28 5.8
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 136 bits (329), Expect = 1e-32
Identities = 63/82 (76%), Positives = 70/82 (85%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
VD+ ++ + LQGF
Sbjct: 113 VDNVLDVV-RKEAEGCDCLQGF 133
Score = 109 bits (263), Expect = 1e-24
Identities = 70/140 (50%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQGAS-T 278
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQLERINVYY + G
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 279 SREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T SV G G K G + VL
Sbjct: 61 PRAV---LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 453 DVVRKEAERLRLXCRGFQAT 512
DVVRKEAE +GFQ T
Sbjct: 118 DVVRKEAEGCD-CLQGFQLT 136
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 134 bits (325), Expect = 3e-32
Identities = 62/82 (75%), Positives = 70/82 (85%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EASGGKYVPRA +VDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
VD+ ++ ++ LQGF
Sbjct: 113 VDNVLDVV-RKEAESCDCLQGF 133
Score = 119 bits (286), Expect = 2e-27
Identities = 74/139 (53%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQGASTS 281
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQLERINVYY + G
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 282 REL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVLD 455
+ LEP T SV G G K G + VLD
Sbjct: 61 PRA--CLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 456 VVRKEAERLRLXCRGFQAT 512
VVRKEAE +GFQ T
Sbjct: 119 VVRKEAESCD-CLQGFQMT 136
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 134 bits (323), Expect = 6e-32
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
VD+ ++ + LQGF
Sbjct: 113 VDNVLDVI-RKEAEGCDCLQGF 133
Score = 103 bits (247), Expect = 1e-22
Identities = 66/140 (47%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKL-QGAST 278
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQLERI+VYY + G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 279 SREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T SV G G K G + VL
Sbjct: 61 PRAV---LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 453 DVVRKEAERLRLXCRGFQAT 512
DV+RKEAE +GFQ T
Sbjct: 118 DVIRKEAEGCD-CLQGFQLT 136
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 134 bits (323), Expect = 6e-32
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA+ GKYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
VD+ ++ + LQGF
Sbjct: 113 VDNVLDVI-RKEAEGCDCLQGF 133
Score = 102 bits (244), Expect = 2e-22
Identities = 65/140 (46%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKL-QGAST 278
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQLERI+VYY + G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 279 SREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T SV G G K G + VL
Sbjct: 61 PRAV---LVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 453 DVVRKEAERLRLXCRGFQAT 512
DV+RKEAE +GFQ T
Sbjct: 118 DVIRKEAEGCD-CLQGFQLT 136
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 130 bits (314), Expect = 7e-31
Identities = 60/82 (73%), Positives = 68/82 (82%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
VD+ ++ ++ LQGF
Sbjct: 113 VDNVLDVV-RKEAESTDCLQGF 133
Score = 109 bits (263), Expect = 1e-24
Identities = 71/139 (51%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQGASTS 281
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERINVYY + S
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYN--EAGSNK 58
Query: 282 REL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVLD 455
+ LEP T SV G G K G + VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 456 VVRKEAERLRLXCRGFQAT 512
VVRKEAE +GFQ T
Sbjct: 119 VVRKEAESTD-CLQGFQLT 136
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 130 bits (314), Expect = 7e-31
Identities = 60/82 (73%), Positives = 68/82 (82%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EA KYVPRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
VD+ ++ ++ LQGF
Sbjct: 113 VDNVLDVV-RKEAESTDCLQGF 133
Score = 109 bits (263), Expect = 1e-24
Identities = 71/139 (51%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQGASTS 281
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERINVYY + S
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYN--EAGSNK 58
Query: 282 REL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVLD 455
+ LEP T SV G G K G + VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 456 VVRKEAERLRLXCRGFQAT 512
VVRKEAE +GFQ T
Sbjct: 119 VVRKEAESTD-CLQGFQLT 136
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/82 (50%), Positives = 60/82 (73%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E G KYVPRA++VDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+
Sbjct: 53 EMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEI 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
VD +R +AA L+GF
Sbjct: 113 VDKVLSVI-RREAEAADSLEGF 133
Score = 85.8 bits (203), Expect = 2e-17
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQG 269
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/82 (50%), Positives = 60/82 (73%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E G KYVPRA++VDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+
Sbjct: 53 EMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEI 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
VD +R +AA L+GF
Sbjct: 113 VDKVLSVI-RREAEAADSLEGF 133
Score = 85.8 bits (203), Expect = 2e-17
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQG 269
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 82.2 bits (194), Expect = 3e-16
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +2
Query: 242 QCLLYEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 421
Q E+ GK+VPRA+ VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 422 EGAELVD 442
G EL+D
Sbjct: 113 IGKELID 119
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 203
RE V I GQ G QIG WE+ EHG+D G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 78.2 bits (184), Expect = 4e-15
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRA+ VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL
Sbjct: 55 ETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKEL 114
Query: 437 VD 442
+D
Sbjct: 115 ID 116
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 236
MREIV I GQ G QIG WE+ EHGI G D+ +E
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVE 45
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 77.4 bits (182), Expect = 7e-15
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 437 VD 442
+D
Sbjct: 115 ID 116
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 77.4 bits (182), Expect = 7e-15
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E+
Sbjct: 54 ETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 113
Query: 437 VD 442
+D
Sbjct: 114 ID 115
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
RE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 41
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 77.4 bits (182), Expect = 7e-15
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 437 VD 442
+D
Sbjct: 115 ID 116
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 77.4 bits (182), Expect = 7e-15
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E G++VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 437 VD 442
+D
Sbjct: 115 ID 116
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 227
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 76.6 bits (180), Expect = 1e-14
Identities = 28/63 (44%), Positives = 45/63 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
+ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL
Sbjct: 53 DTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
Query: 437 VDS 445
+D+
Sbjct: 113 IDT 115
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYT 257
MRE++ I GQ G QIG WE+ EHGI G S + E +++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFS 52
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 76.6 bits (180), Expect = 1e-14
Identities = 28/63 (44%), Positives = 45/63 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
+ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL
Sbjct: 53 DTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
Query: 437 VDS 445
+D+
Sbjct: 113 IDT 115
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYT 257
MRE++ I GQ G QIG WE+ EHGI G D E +++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFS 52
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 76.6 bits (180), Expect = 1e-14
Identities = 34/82 (41%), Positives = 52/82 (63%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
+ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL
Sbjct: 53 DTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+D+ T +R LQGF
Sbjct: 113 IDT-TLDRIRRLADNCSGLQGF 133
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 203
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 76.6 bits (180), Expect = 1e-14
Identities = 28/63 (44%), Positives = 45/63 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
+ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL
Sbjct: 53 DTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
Query: 437 VDS 445
+D+
Sbjct: 113 IDT 115
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYT 257
MRE++ I GQ G QIG WE+ EHGI G D E +++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFS 52
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 76.6 bits (180), Expect = 1e-14
Identities = 28/63 (44%), Positives = 45/63 (71%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
+ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL
Sbjct: 53 DTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
Query: 437 VDS 445
+D+
Sbjct: 113 IDT 115
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYT 257
MRE++ I GQ G QIG WE+ EHGI G S + E +++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFS 52
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 76.6 bits (180), Expect = 1e-14
Identities = 34/82 (41%), Positives = 52/82 (63%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
+ G+YVPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL
Sbjct: 53 DTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+D+ T +R LQGF
Sbjct: 113 IDT-TLDRIRRLADNCSGLQGF 133
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 203
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 76.2 bits (179), Expect = 2e-14
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRA+MVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E+
Sbjct: 60 ETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEI 119
Query: 437 VD 442
+D
Sbjct: 120 ID 121
Score = 39.5 bits (88), Expect = 0.002
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYTK-LQGAS 275
RE++ I GQ G Q+G WE+ EHGI G + + L + + N ++++ + G
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKH 66
Query: 276 TSREL*WWTLSLEPWTPSVPGRXXXXXXXXXXXXXXXXXGITGRKDITQ---RGLNWLI- 443
R + + LEP TP R +TG++D RG ++ I
Sbjct: 67 VPRAI---MVDLEP-TPIDEIRTGTYKTLFHPEQL-----LTGKEDAANNYARG-HYTIG 116
Query: 444 -PVLDVVRKEAERLRLXCRGFQ 506
++DVV RL CRG Q
Sbjct: 117 KEIIDVVMDRVRRLVENCRGLQ 138
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/78 (41%), Positives = 51/78 (65%)
Frame = +2
Query: 269 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSG 448
G++VPR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+
Sbjct: 56 GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDT- 114
Query: 449 TGCS*KRSRKAAIXLQGF 502
T +R LQGF
Sbjct: 115 TLDRIRRLANNCEGLQGF 132
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGI 191
MRE++ I GQ G QIG WE+ EHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 69.3 bits (162), Expect = 2e-12
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E +GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E+
Sbjct: 61 ETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREM 120
Query: 437 VD 442
+D
Sbjct: 121 ID 122
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS--DLQLERINVYYTKLQG 269
RE++ I GQ G QIG WE+ EHGI G + D D + E IN ++ + G
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAG 64
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 69.3 bits (162), Expect = 2e-12
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E +GGK+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E+
Sbjct: 33 ETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREM 92
Query: 437 VD 442
+D
Sbjct: 93 ID 94
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 248 LLYEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHY 418
L Y+A YVPRAV+VDLEP ++ + P F +F DN GAGNNWA G Y
Sbjct: 52 LFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 419 TEGAEL 436
+G E+
Sbjct: 111 CQGQEV 116
Score = 44.4 bits (100), Expect = 6e-05
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 111 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYY 254
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 248 LLYEASGGKYVPRAVMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHY 418
L Y+A YVPRAV+VDLEP ++ + P F +F DN GAGNNWA G Y
Sbjct: 52 LFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 419 TEGAEL 436
+G E+
Sbjct: 111 CQGQEV 116
Score = 44.4 bits (100), Expect = 6e-05
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 111 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYY 254
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 30.7 bits (66), Expect = 0.82
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 112 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTIRS 261
SSTSR + +E SS S T+TA T + TPT + AS ST+ S
Sbjct: 213 SSTSRSTSTPSSTEASSTVTS-TTTARTTTTMIPTTPTTTTIASTSTVTS 261
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 30.7 bits (66), Expect = 0.82
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 112 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTIRS 261
SSTSR + +E SS S T+TA T + TPT + AS ST+ S
Sbjct: 195 SSTSRSTSTPSSTEASSTVTS-TTTARTTTTMIPTTPTTTTIASTSTVTS 243
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 251 VDIDAFKLQVGVAAVSTRGVNAVLVR 174
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 251 VDIDAFKLQVGVAAVSTRGVNAVLVR 174
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 251 VDIDAFKLQVGVAAVSTRGVNAVLVR 174
V +D F +QVG+A + TR V + VR
Sbjct: 436 VTVDVFSVQVGIATLQTRDVPVLNVR 461
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 251 VDIDAFKLQVGVAAVSTRGVNAVLVR 174
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 251 VDIDAFKLQVGVAAVSTRGVNAVLVR 174
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 251 VDIDAFKLQVGVAAVSTRGVNAVLVR 174
V +D F +QVG+A + TR V + VR
Sbjct: 436 VTVDVFSVQVGIATLQTRDVPVLNVR 461
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 386 GAGNNWAKGHYTEGAELVDSGTGCS*KRSRKAAIXLQGFSS--YSILLGRRYWIWYW 550
GA NW Y E A LVD G + ++SR A + + + L+ ++W W
Sbjct: 277 GAMENWGLVTYREIALLVDPGVTSTRQKSRVALVVAHELAHLWFGNLVTMKWWTDLW 333
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 386 GAGNNWAKGHYTEGAELVDSGTGCS*KRSRKAAIXLQGFSS--YSILLGRRYWIWYW 550
GA NW Y E A LVD G + ++SR A + + + L+ ++W W
Sbjct: 341 GAMENWGLVTYREIALLVDPGVTSTRQKSRVALVVAHELAHLWFGNLVTMKWWTDLW 397
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +1
Query: 58 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSL 234
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAV 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,681,042
Number of Sequences: 27780
Number of extensions: 322608
Number of successful extensions: 1041
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -