Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1161
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 136 8e-33
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 136 1e-32
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 134 3e-32
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 133 7e-32
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 131 3e-31
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 130 9e-31
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 128 2e-30
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 126 8e-30
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 126 8e-30
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 80 1e-15
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 79 2e-15
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 79 2e-15
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 79 2e-15
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 79 2e-15
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 79 2e-15
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 79 2e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 55 4e-08
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 54 5e-08
At4g37190.1 68417.m05265 expressed protein 30 1.0
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 29 1.8
At3g09000.1 68416.m01053 proline-rich family protein 29 3.1
At5g13200.1 68418.m01512 GRAM domain-containing protein / ABA-re... 28 4.1
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 28 5.4
At4g22770.1 68417.m03287 DNA-binding family protein contains a A... 27 7.2
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 27 7.2
At4g26060.1 68417.m03751 expressed protein 27 9.5
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 136 bits (330), Expect = 8e-33
Identities = 64/82 (78%), Positives = 70/82 (85%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EASGGKYVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+DS K + + LQGF
Sbjct: 113 IDSVLDVVRKEAENSD-CLQGF 133
Score = 103 bits (246), Expect = 1e-22
Identities = 65/138 (47%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQGAS-T 278
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI+VY+ + G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 279 SREL*WWTLSLEPWTPSV--PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T G G K G + VL
Sbjct: 61 PRAV---LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 453 DVVRKEAERLRLXCRGFQ 506
DVVRKEAE +GFQ
Sbjct: 118 DVVRKEAENSD-CLQGFQ 134
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 136 bits (329), Expect = 1e-32
Identities = 64/82 (78%), Positives = 69/82 (84%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EASGGKYVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+DS K + LQGF
Sbjct: 113 IDSVLDVVRKEAENCD-CLQGF 133
Score = 101 bits (242), Expect = 4e-22
Identities = 64/138 (46%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQGAS-T 278
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLERINVY+ + G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 279 SREL*WWTLSLEPWTPSV--PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T G G K G + VL
Sbjct: 61 PRAV---LMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 453 DVVRKEAERLRLXCRGFQ 506
DVVRKEAE +GFQ
Sbjct: 118 DVVRKEAENCD-CLQGFQ 134
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 134 bits (325), Expect = 3e-32
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EASGG+YVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 54 EASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 113
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+D+ K + LQGF
Sbjct: 114 IDAVLDVVRKEAENCD-CLQGF 134
Score = 106 bits (255), Expect = 1e-23
Identities = 68/139 (48%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD-SDLQLERINVYYTKLQGAS- 275
MREI+HIQ GQCGNQIG+KFWEVI DEHGID+TG YSGD +DLQLERINVYY + G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 276 TSREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPV 449
R + + LEP T S+ G G K G + V
Sbjct: 61 VPRAV---LMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 450 LDVVRKEAERLRLXCRGFQ 506
LDVVRKEAE +GFQ
Sbjct: 118 LDVVRKEAENCD-CLQGFQ 135
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 133 bits (322), Expect = 7e-32
Identities = 61/82 (74%), Positives = 69/82 (84%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EASGG+YVPRAV++DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 54 EASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 113
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+D+ K + LQGF
Sbjct: 114 IDAVLDVVRKEAENCD-CLQGF 134
Score = 105 bits (251), Expect = 3e-23
Identities = 66/139 (47%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLERINVYYTKLQGAS- 275
MREI+H+Q GQCGNQIG+KFWEVI DEHG+D TG Y+GDS DLQLERINVYY + G
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 276 TSREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPV 449
R + + LEP T S+ G G K G + V
Sbjct: 61 VPRAV---LMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 450 LDVVRKEAERLRLXCRGFQ 506
LDVVRKEAE +GFQ
Sbjct: 118 LDVVRKEAENCD-CLQGFQ 135
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 131 bits (317), Expect = 3e-31
Identities = 62/82 (75%), Positives = 68/82 (82%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EAS G+YVPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+DS K + LQGF
Sbjct: 113 IDSVLDVVRKEAENCD-CLQGF 133
Score = 103 bits (246), Expect = 1e-22
Identities = 65/138 (47%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQ-GAST 278
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+NVYY + G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 279 SREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T SV G G K G + VL
Sbjct: 61 PRAV---LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 453 DVVRKEAERLRLXCRGFQ 506
DVVRKEAE +GFQ
Sbjct: 118 DVVRKEAENCD-CLQGFQ 134
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 130 bits (313), Expect = 9e-31
Identities = 61/82 (74%), Positives = 68/82 (82%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EAS G++VPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+DS K + LQGF
Sbjct: 113 IDSVLDVVRKEAENCD-CLQGF 133
Score = 104 bits (250), Expect = 4e-23
Identities = 65/138 (47%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQ-GAST 278
MREI+HIQ GQCGNQIGAKFWEV+ EHGID+TG Y G++DLQLER+NVYY + G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 279 SREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T SV G G K G + VL
Sbjct: 61 PRAV---LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 453 DVVRKEAERLRLXCRGFQ 506
DVVRKEAE +GFQ
Sbjct: 118 DVVRKEAENCD-CLQGFQ 134
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 128 bits (310), Expect = 2e-30
Identities = 59/82 (71%), Positives = 68/82 (82%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EAS G+YVPRA+++DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+D+ K + LQGF
Sbjct: 113 IDAVLDVVRKEAENCD-CLQGF 133
Score = 106 bits (254), Expect = 1e-23
Identities = 66/138 (47%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQ-GAST 278
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G+SDLQLER+NVYY + G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 279 SREL*WWTLSLEPWT-PSV-PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T SV G G K G + VL
Sbjct: 61 PRAI---LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 117
Query: 453 DVVRKEAERLRLXCRGFQ 506
DVVRKEAE +GFQ
Sbjct: 118 DVVRKEAENCD-CLQGFQ 134
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 126 bits (305), Expect = 8e-30
Identities = 59/82 (71%), Positives = 67/82 (81%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EAS G++VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+DS K + LQGF
Sbjct: 113 IDSVLDVVRKEAENCD-CLQGF 133
Score = 106 bits (255), Expect = 1e-23
Identities = 66/138 (47%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQ-GAST 278
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERINVYY + G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 279 SREL*WWTLSLEPWTPSV--PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T G G K G + VL
Sbjct: 61 PRAV---LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 453 DVVRKEAERLRLXCRGFQ 506
DVVRKEAE +GFQ
Sbjct: 118 DVVRKEAENCD-CLQGFQ 134
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 126 bits (305), Expect = 8e-30
Identities = 59/82 (71%), Positives = 67/82 (81%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
EAS G++VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Query: 437 VDSGTGCS*KRSRKAAIXLQGF 502
+DS K + LQGF
Sbjct: 113 IDSVLDVVRKEAENCD-CLQGF 133
Score = 106 bits (255), Expect = 1e-23
Identities = 66/138 (47%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYTKLQ-GAST 278
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERINVYY + G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 279 SREL*WWTLSLEPWTPSV--PGRXXXXXXXXXXXXXXXXXGITGRKDITQRGLNWLIPVL 452
R + + LEP T G G K G + VL
Sbjct: 61 PRAV---LMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 453 DVVRKEAERLRLXCRGFQ 506
DVVRKEAE +GFQ
Sbjct: 118 DVVRKEAENCD-CLQGFQ 134
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 80.2 bits (189), Expect = 1e-15
Identities = 42/93 (45%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E S G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREI 114
Query: 437 VDSGTGCS*KRSRKAA---IXLQGFSSYSILLG 526
VD+ C +R RK A LQGF ++ + G
Sbjct: 115 VDT---CL-ERLRKLADNCTGLQGFLVFNAVGG 143
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 221
MREI+ I GQ G Q+G WE+ EHGI G DS
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDS 40
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEI 114
Query: 437 VD 442
VD
Sbjct: 115 VD 116
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYTK 260
MREI+ I GQ G Q+G WE+ EHGI G D+ + + + N ++++
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSE 55
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEI 114
Query: 437 VD 442
VD
Sbjct: 115 VD 116
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYTK 260
MREI+ I GQ G Q+G WE+ EHGI G D+ + + + N ++++
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSE 55
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 79.0 bits (186), Expect = 2e-15
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114
Query: 437 VD 442
VD
Sbjct: 115 VD 116
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 79.0 bits (186), Expect = 2e-15
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114
Query: 437 VD 442
VD
Sbjct: 115 VD 116
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 79.0 bits (186), Expect = 2e-15
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114
Query: 437 VD 442
VD
Sbjct: 115 VD 116
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 79.0 bits (186), Expect = 2e-15
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 257 EASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 436
E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 55 ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114
Query: 437 VD 442
VD
Sbjct: 115 VD 116
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 218
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 YEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKG-HYTE 424
Y+A Y+PRA+++DLEP ++ +++G + ++ +N GAGNNWA G H +
Sbjct: 53 YQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQGK 112
Query: 425 GAE 433
G E
Sbjct: 113 GVE 115
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYY 254
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFF 52
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 54.4 bits (125), Expect = 5e-08
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 YEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKG-HYTE 424
Y+A Y+PRA+++DLEP ++ +++G + ++ +N GAGNNWA G H +
Sbjct: 53 YQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQGK 112
Query: 425 GAE 433
G E
Sbjct: 113 GVE 115
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 105 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYY 254
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFF 52
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 102 MREIVHIQAGQCGNQIGAKFW 164
MREIV IQ G+ N +G+ FW
Sbjct: 1 MREIVTIQVGEFANFVGSHFW 21
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 164 PELCSDLIPALTRLDVDDFPHDCTKNLEPP 75
P+L S ++ ++ LD+ D P DC L PP
Sbjct: 50 PDLASPVLGKMSILDLPDLPLDCILELLPP 79
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = +1
Query: 109 KSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTIRSFRGQVRPAS 288
K TS AG+R SSG TS TP + TPT S + ++T S P S
Sbjct: 133 KPQTSSSSVAGLRRPSSSGSSRSTSRPATP-TRRSTTPTTSTSRPVTTRASNSRSSTPTS 191
>At5g13200.1 68418.m01512 GRAM domain-containing protein /
ABA-responsive protein-related similar to ABA-responsive
protein [Hordeum vulgare] GI:4103635; contains Pfam
profile PF02893: GRAM domain
Length = 272
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 334 RAVWANLPTGQLRLRTVWGGE*LGERTLHRGG*TG*FR 447
R +W NL TG T WG L + + +GG FR
Sbjct: 109 RNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFR 146
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 108 EIVHIQAGQCGNQIGAKFWEVISD 179
+I++ A + G+ GA FWEVIS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At4g22770.1 68417.m03287 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 334
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 181 STALTPRVLTAATPTCSLNASMSTIRSFRGQVRPAS 288
+ L+P +++A PT S ST RG+++PA+
Sbjct: 87 AVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPAT 122
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 393 PAPDCPKTKLSGRKICPNGPERTESMVPG-SRSTITARGT 277
PAP P L ICP+G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At4g26060.1 68417.m03751 expressed protein
Length = 133
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 497 GFSSYSILLGRRY-WIWYWGTLLIFQNPVKSIP 592
G +S LLG + ++WY+ TLL F N + P
Sbjct: 72 GIGWFSFLLGFVFPFLWYYATLLYFGNYYRKDP 104
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,008,264
Number of Sequences: 28952
Number of extensions: 308976
Number of successful extensions: 972
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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