Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1157
(499 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 29 0.51
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 29 0.51
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.2
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 27 1.2
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 1.2
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 27 1.6
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 1.6
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.1
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 26 3.6
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 26 3.6
SPAC1399.01c |||purine permease |Schizosaccharomyces pombe|chr 1... 26 3.6
SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce... 25 4.8
SPAC5D6.06c |||UDP-GlcNAc transferase associated protein Alg14|S... 25 8.4
SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyc... 25 8.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 8.4
SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual 25 8.4
SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit S... 25 8.4
SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces p... 25 8.4
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 28.7 bits (61), Expect = 0.51
Identities = 27/99 (27%), Positives = 42/99 (42%)
Frame = +1
Query: 163 AWDYVDDTDKSIAILNVQEILKDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMPVQPLT 342
A++ DT + LN E + M +QG + SP + +PV P QPL
Sbjct: 242 AYEVTGDTRAASPTLNPFEQMMAMTNQGMSVSPGVE----TTSSPFF--TAPVEPNQPLQ 295
Query: 343 SLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSS 459
L + T P + + L++PS+ D + NSS
Sbjct: 296 PLRPSMTGPVPSSMGSEATLNMPSTYGIDSNLYTNSNSS 334
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 28.7 bits (61), Expect = 0.51
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 274 PKPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSS 417
P+P+ ++P V P +PV P T++ + P ++P +VP S
Sbjct: 222 PQPA-VAPSVSAVVPNLPVHPATAINAQSQSGNPLSNPLFQPSNVPQS 268
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 337 LTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSS*PWSTPIL 483
L+S T T S S S N S+P++ + T +I +S PWS P++
Sbjct: 362 LSSSVFTNTTS----SSNSTNSSIPTTYPSNSTTYQNITTSYPWSQPVV 406
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 211 VQEILKDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMP 327
+Q IL+ +A +GD + PKP + I P+ P P
Sbjct: 358 LQSILRSLAIEGDDDEVAKVLPKPPSVPTIQAPIPPEAP 396
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 94 NQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEI-LKDMASQGDYAVKHQ 267
NQ S D+D+ ASS++S A D+D N+ +A GD + +H+
Sbjct: 3 NQSSSGSNTSDLDEESASSLVSSAASPFIDSDLETPRPNISRASTGQLAEDGDTSSQHE 61
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 27.1 bits (57), Expect = 1.6
Identities = 24/87 (27%), Positives = 38/87 (43%)
Frame = +1
Query: 55 VATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDM 234
V T+A A + + +DNEIP D A+S + D+ I L+ +L +
Sbjct: 386 VKTAAELASLQNVTETTDNEIPNSPDFLDAAS----------EEDEHIPSLDSSSLLTPL 435
Query: 235 ASQGDYAVKHQRWPKPSELSPIYLPVS 315
A A + ++ PS SP+ P S
Sbjct: 436 ALPNKKAFQPVKFRVPSFSSPLVKPAS 462
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 1.6
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 253 AVKHQRWPKPSELSPIYLPVSPVMPVQPLT---SLTLTQTASGPETSPAS 393
AVKH P P P+ +SP MP PLT S T S PE+ P S
Sbjct: 739 AVKHH--PPPP---PVRSSISPSMPPAPLTHANSSTPMNYVSQPESPPQS 783
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 2.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 328 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSS*PWSTP 477
VQ T +++ + P S AS ++SVPSS + I+SS S+P
Sbjct: 444 VQTTTVSSISTSVKQPTASVASSSVSVPSSSSVQPQSSTPISSSSSASSP 493
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Frame = +1
Query: 271 WPKPSELS-PIY-----LPVSPVMPVQPLTSLTLTQTASGPETSP 387
+P P+ +S P Y +PVSP +PV P +S + P + P
Sbjct: 287 YPHPTGISLPFYPFDSGIPVSPNIPVSPSSSFVPMYPTTFPSSKP 331
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 25.8 bits (54), Expect = 3.6
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 280 PSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDT 423
PS+ S I SPV + TSLT Q AS P+ +D+ +V ++T
Sbjct: 72 PSQNSEIIEKNSPVNKLNSSTSLTTHQLASLPKLE-VTDHDNVSEAET 118
>SPAC1399.01c |||purine permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 282 RFGPPLMLDCIIALAGHVLQDLLNVEDGDAFVSVIDVVP 166
RFGPPLM + L G V+ +++ G S+ID P
Sbjct: 286 RFGPPLMKTTSVVL-GLVVGMIISAATGYWDHSIIDAAP 323
>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 25.4 bits (53), Expect = 4.8
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 247 DYAVKHQRWPKPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVP 411
DY+ ++P + SP+ + + +P S + QTA +S SD S P
Sbjct: 152 DYSKVSGKYPSVIDNSPVKSKLGALPSARPRLSYSAAQTAPISLSSEGSDYFSRP 206
>SPAC5D6.06c |||UDP-GlcNAc transferase associated protein
Alg14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 360 DGVRSGNFAGFRQSLGPFFG---HVGQNLNLINQL 455
+ ++S F++ L FFG H G+ LNL+N L
Sbjct: 23 NAIKSSKKKPFQKHLLVFFGSGGHTGEMLNLLNAL 57
>SPAC19B12.10 |sst2||human AMSH protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 24.6 bits (51), Expect = 8.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 277 KPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSD 420
+PS P+ P++ L+ L + +S SP S LS SSD
Sbjct: 131 QPSLEKPVSYVDEPILEQWALSDLQILPPSSTDLLSPDSQKLSKSSSD 178
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 24.6 bits (51), Expect = 8.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 334 PLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSS 459
PLTS T + S T+P+ + SV + + T + S NS+
Sbjct: 390 PLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANST 431
Score = 24.6 bits (51), Expect = 8.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 334 PLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSS 459
PLTS T + S T+P+ + SV + + T + S NS+
Sbjct: 504 PLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANST 545
>SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 978
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 288 IIAHLSAGIPGDACAAANVINSYTDGVRSGNFA-GF 392
+I +A + D A N+I+ Y + GNFA GF
Sbjct: 646 LIGKANAALSSDLSALENIISVYCSLMAIGNFAKGF 681
>SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit
Spo6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 24.6 bits (51), Expect = 8.4
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = +3
Query: 441 LINQLVLTLVNSDTLV 488
L+N+++ TL+NSD+LV
Sbjct: 201 LLNRILFTLLNSDSLV 216
>SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 24.6 bits (51), Expect = 8.4
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 253 AVKHQRWPKPSELSPIYLPVSPVMPVQPLTSLTLTQT-ASGPETSPASDNLS 405
A+K+Q KPS SP++ + P T +++ T S P P + L+
Sbjct: 209 ALKNQATRKPSSSPQTTQDSSPILTMAPSTPVSVGSTPPSTPSVLPIAKQLA 260
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,042,181
Number of Sequences: 5004
Number of extensions: 41012
Number of successful extensions: 166
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 196153982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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