Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1157
(499 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 29 4.6
M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase... 29 4.6
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 29 4.6
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 29 4.6
Y07567-1|CAA68852.1| 774|Drosophila melanogaster TF125 type II ... 28 6.1
X98235-1|CAA66887.1| 1182|Drosophila melanogaster TF125 protein. 28 6.1
BT016074-1|AAV36959.1| 582|Drosophila melanogaster LP06206p pro... 28 6.1
BT001437-1|AAN71192.1| 195|Drosophila melanogaster GH24648p pro... 28 6.1
AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p pro... 28 6.1
AL023893-2|CAA19653.1| 582|Drosophila melanogaster EG:132E8.2,F... 28 6.1
AF181649-1|AAD55435.1| 437|Drosophila melanogaster SNF1A protein. 28 6.1
AF020310-1|AAB71398.1| 582|Drosophila melanogaster SNF1A/AMP-ac... 28 6.1
AF020309-1|AAB71397.1| 582|Drosophila melanogaster SNF1A/AMP-ac... 28 6.1
AE014298-193|AAS65245.1| 582|Drosophila melanogaster CG3051-PC,... 28 6.1
AE014298-192|AAN09043.1| 582|Drosophila melanogaster CG3051-PB,... 28 6.1
AE014298-191|AAF45614.1| 582|Drosophila melanogaster CG3051-PA,... 28 6.1
AE014297-3402|AAF56201.2| 1182|Drosophila melanogaster CG13598-P... 28 6.1
AE014297-3401|AAO41596.1| 1362|Drosophila melanogaster CG13598-P... 28 6.1
AE014296-776|AAN11589.1| 575|Drosophila melanogaster CG32260-PA... 28 6.1
S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ... 28 8.1
BT025855-1|ABF85755.1| 217|Drosophila melanogaster IP15326p pro... 28 8.1
BT023247-1|AAY55663.1| 353|Drosophila melanogaster IP10677p pro... 28 8.1
BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p pro... 28 8.1
AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB... 28 8.1
AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA... 28 8.1
AE014297-4262|AAF56812.2| 366|Drosophila melanogaster CG14061-P... 28 8.1
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA... 28 8.1
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC... 28 8.1
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB... 28 8.1
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti... 28 8.1
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 274 PKPSELSPIYLPVSPV-MPVQPLTSLTLTQTASGPETSPASDNLSV--PSSDTWDKT 435
PK S SP+Y P SP P + T +A+ P SP N+S+ PSS + T
Sbjct: 1791 PKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYSPT 1844
>M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase II
largest subunit protein.
Length = 408
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 274 PKPSELSPIYLPVSPV-MPVQPLTSLTLTQTASGPETSPASDNLSV--PSSDTWDKT 435
PK S SP+Y P SP P + T +A+ P SP N+S+ PSS + T
Sbjct: 310 PKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYSPT 363
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p protein.
Length = 1429
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 274 PKPSELSPIYLPVSPV-MPVQPLTSLTLTQTASGPETSPASDNLSV--PSSDTWDKT 435
PK S SP+Y P SP P + T +A+ P SP N+S+ PSS + T
Sbjct: 1331 PKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYSPT 1384
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 274 PKPSELSPIYLPVSPV-MPVQPLTSLTLTQTASGPETSPASDNLSV--PSSDTWDKT 435
PK S SP+Y P SP P + T +A+ P SP N+S+ PSS + T
Sbjct: 1789 PKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYSPT 1842
>Y07567-1|CAA68852.1| 774|Drosophila melanogaster TF125 type II
protein.
Length = 774
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 452 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSGCTGIT 318
L+ Q+L V+ G + L AG V GPDA +++ ++ + +T
Sbjct: 585 LLQNGQILQQVNLIGQQLLMPAGLVMGPDATLLQIQNMPATSLMT 629
>X98235-1|CAA66887.1| 1182|Drosophila melanogaster TF125 protein.
Length = 1182
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 452 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSGCTGIT 318
L+ Q+L V+ G + L AG V GPDA +++ ++ + +T
Sbjct: 834 LLQNGQILQQVNLIGQQLLMPAGLVMGPDATLLQIQNMPATSLMT 878
>BT016074-1|AAV36959.1| 582|Drosophila melanogaster LP06206p
protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/105 (25%), Positives = 42/105 (40%)
Frame = +1
Query: 22 TKMKPIFLVLLVATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIA 201
+K I L + A A + IN Y +++ GK S + + + D
Sbjct: 468 SKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQ----VDAKSY 523
Query: 202 ILNVQEILKDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMPVQP 336
+L+ + + D QGD + P P L VS VMP+QP
Sbjct: 524 LLDFKSLTNDEVEQGDDVIMESLTPPP-------LSVSGVMPLQP 561
>BT001437-1|AAN71192.1| 195|Drosophila melanogaster GH24648p
protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +1
Query: 274 PKPSELSPI--YLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT 435
P P PI +P P +P P T T P+T P + L SS T T
Sbjct: 53 PPPPPFQPIGPLIPPQPALPSTPAVIPTFQPTPPNPQT-PVTPPLITTSSSTTSST 107
>AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p
protein.
Length = 1371
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 452 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSGCTGIT 318
L+ Q+L V+ G + L AG V GPDA +++ ++ + +T
Sbjct: 825 LLQNGQILQQVNLIGQQLLMPAGLVMGPDATLLQIQNMPATSLMT 869
>AL023893-2|CAA19653.1| 582|Drosophila melanogaster
EG:132E8.2,FBgn0023169;SNF1A protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/105 (25%), Positives = 42/105 (40%)
Frame = +1
Query: 22 TKMKPIFLVLLVATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIA 201
+K I L + A A + IN Y +++ GK S + + + D
Sbjct: 468 SKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQ----VDAKSY 523
Query: 202 ILNVQEILKDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMPVQP 336
+L+ + + D QGD + P P L VS VMP+QP
Sbjct: 524 LLDFKSLTNDEVEQGDDVIMESLTPPP-------LSVSGVMPLQP 561
>AF181649-1|AAD55435.1| 437|Drosophila melanogaster SNF1A protein.
Length = 437
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/105 (25%), Positives = 42/105 (40%)
Frame = +1
Query: 22 TKMKPIFLVLLVATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIA 201
+K I L + A A + IN Y +++ GK S + + + D
Sbjct: 323 SKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQ----VDAKSY 378
Query: 202 ILNVQEILKDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMPVQP 336
+L+ + + D QGD + P P L VS VMP+QP
Sbjct: 379 LLDFKSLTNDEVEQGDDVIMESLTPPP-------LSVSGVMPLQP 416
>AF020310-1|AAB71398.1| 582|Drosophila melanogaster
SNF1A/AMP-activated protein kinase protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/105 (25%), Positives = 42/105 (40%)
Frame = +1
Query: 22 TKMKPIFLVLLVATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIA 201
+K I L + A A + IN Y +++ GK S + + + D
Sbjct: 468 SKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQ----VDAKSY 523
Query: 202 ILNVQEILKDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMPVQP 336
+L+ + + D QGD + P P L VS VMP+QP
Sbjct: 524 LLDFKSLTNDEVEQGDDVIMESLTPPP-------LSVSGVMPLQP 561
>AF020309-1|AAB71397.1| 582|Drosophila melanogaster
SNF1A/AMP-activated protein kinase protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/105 (25%), Positives = 42/105 (40%)
Frame = +1
Query: 22 TKMKPIFLVLLVATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIA 201
+K I L + A A + IN Y +++ GK S + + + D
Sbjct: 468 SKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQ----VDAKSY 523
Query: 202 ILNVQEILKDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMPVQP 336
+L+ + + D QGD + P P L VS VMP+QP
Sbjct: 524 LLDFKSLTNDEVEQGDDVIMESLTPPP-------LSVSGVMPLQP 561
>AE014298-193|AAS65245.1| 582|Drosophila melanogaster CG3051-PC,
isoform C protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/105 (25%), Positives = 42/105 (40%)
Frame = +1
Query: 22 TKMKPIFLVLLVATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIA 201
+K I L + A A + IN Y +++ GK S + + + D
Sbjct: 468 SKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQ----VDAKSY 523
Query: 202 ILNVQEILKDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMPVQP 336
+L+ + + D QGD + P P L VS VMP+QP
Sbjct: 524 LLDFKSLTNDEVEQGDDVIMESLTPPP-------LSVSGVMPLQP 561
>AE014298-192|AAN09043.1| 582|Drosophila melanogaster CG3051-PB,
isoform B protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/105 (25%), Positives = 42/105 (40%)
Frame = +1
Query: 22 TKMKPIFLVLLVATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIA 201
+K I L + A A + IN Y +++ GK S + + + D
Sbjct: 468 SKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQ----VDAKSY 523
Query: 202 ILNVQEILKDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMPVQP 336
+L+ + + D QGD + P P L VS VMP+QP
Sbjct: 524 LLDFKSLTNDEVEQGDDVIMESLTPPP-------LSVSGVMPLQP 561
>AE014298-191|AAF45614.1| 582|Drosophila melanogaster CG3051-PA,
isoform A protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/105 (25%), Positives = 42/105 (40%)
Frame = +1
Query: 22 TKMKPIFLVLLVATSAYAAPSVTINQYSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIA 201
+K I L + A A + IN Y +++ GK S + + + D
Sbjct: 468 SKPNDIMLEVYRAMKALSYEWKIINPYHVRVRRQNVKTGKFSKMSLQLYQ----VDAKSY 523
Query: 202 ILNVQEILKDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMPVQP 336
+L+ + + D QGD + P P L VS VMP+QP
Sbjct: 524 LLDFKSLTNDEVEQGDDVIMESLTPPP-------LSVSGVMPLQP 561
>AE014297-3402|AAF56201.2| 1182|Drosophila melanogaster CG13598-PA,
isoform A protein.
Length = 1182
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 452 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSGCTGIT 318
L+ Q+L V+ G + L AG V GPDA +++ ++ + +T
Sbjct: 834 LLQNGQILQQVNLIGQQLLMPAGLVMGPDATLLQIQNMPATSLMT 878
>AE014297-3401|AAO41596.1| 1362|Drosophila melanogaster CG13598-PB,
isoform B protein.
Length = 1362
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 452 LIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSGCTGIT 318
L+ Q+L V+ G + L AG V GPDA +++ ++ + +T
Sbjct: 834 LLQNGQILQQVNLIGQQLLMPAGLVMGPDATLLQIQNMPATSLMT 878
>AE014296-776|AAN11589.1| 575|Drosophila melanogaster CG32260-PA
protein.
Length = 575
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +1
Query: 274 PKPSELSPI--YLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT 435
P P PI +P P +P P T T P+T P + L SS T T
Sbjct: 53 PPPPPFQPIGPLIPPQPALPSTPAVIPTFQPTPPNPQT-PVTPPLITTSSSTTSST 107
>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
factor TFIID 230kda subunit protein.
Length = 2068
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 220 ILKDMASQGDYAVKHQRWPKPSELSPIYL 306
I K++ GDYA++HQ+ + + S IY+
Sbjct: 1982 IKKEVFDDGDYALQHQQMGQAASQSQIYM 2010
>BT025855-1|ABF85755.1| 217|Drosophila melanogaster IP15326p
protein.
Length = 217
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 220 ILKDMASQGDYAVKHQRWPKPSELSPIYL 306
I K++ GDYA++HQ+ + + S IY+
Sbjct: 131 IKKEVFDDGDYALQHQQMGQAASQSQIYM 159
>BT023247-1|AAY55663.1| 353|Drosophila melanogaster IP10677p
protein.
Length = 353
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 IYLPVSPVMP-VQPLTSLTLTQTASGPETSPASDNLS 405
IYLP+ PV+P +Q T T SGP LS
Sbjct: 266 IYLPIRPVIPFIQTATDALRAFTGSGPYNESYPTTLS 302
>BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p protein.
Length = 2096
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 220 ILKDMASQGDYAVKHQRWPKPSELSPIYL 306
I K++ GDYA++HQ+ + + S IY+
Sbjct: 2010 IKKEVFDDGDYALQHQQMGQAASQSQIYM 2038
>AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB,
isoform B protein.
Length = 1535
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 277 KPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS-SDT 423
+P+ LSP +P+ +T+ T T T P +P+S ++ S SDT
Sbjct: 1007 RPTPLSPAKAAATPIGMNATMTTKTTTTTMMTPSRAPSSTISTISSASDT 1056
>AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA,
isoform A protein.
Length = 1395
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 277 KPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS-SDT 423
+P+ LSP +P+ +T+ T T T P +P+S ++ S SDT
Sbjct: 867 RPTPLSPAKAAATPIGMNATMTTKTTTTTMMTPSRAPSSTISTISSASDT 916
>AE014297-4262|AAF56812.2| 366|Drosophila melanogaster CG14061-PA
protein.
Length = 366
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 IYLPVSPVMP-VQPLTSLTLTQTASGPETSPASDNLS 405
IYLP+ PV+P +Q T T SGP LS
Sbjct: 279 IYLPIRPVIPFIQTATDALRAFTGSGPYNESYPTTLS 315
>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
isoform A protein.
Length = 2065
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 220 ILKDMASQGDYAVKHQRWPKPSELSPIYL 306
I K++ GDYA++HQ+ + + S IY+
Sbjct: 1979 IKKEVFDDGDYALQHQQMGQAASQSQIYM 2007
>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
isoform C protein.
Length = 2098
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 220 ILKDMASQGDYAVKHQRWPKPSELSPIYL 306
I K++ GDYA++HQ+ + + S IY+
Sbjct: 2012 IKKEVFDDGDYALQHQQMGQAASQSQIYM 2040
>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
isoform B protein.
Length = 2129
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 220 ILKDMASQGDYAVKHQRWPKPSELSPIYL 306
I K++ GDYA++HQ+ + + S IY+
Sbjct: 2043 IKKEVFDDGDYALQHQQMGQAASQSQIYM 2071
>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
factor protein.
Length = 2065
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 220 ILKDMASQGDYAVKHQRWPKPSELSPIYL 306
I K++ GDYA++HQ+ + + S IY+
Sbjct: 1979 IKKEVFDDGDYALQHQQMGQAASQSQIYM 2007
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,614,708
Number of Sequences: 53049
Number of extensions: 481326
Number of successful extensions: 1767
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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