Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1157
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 29 1.4
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 29 1.4
AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 29 1.4
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 1.9
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 1.9
U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein. 24 2.8
U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical pr... 24 2.8
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 28 3.3
AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical... 28 3.3
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z48716-3|CAA88599.1| 96|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 7.6
U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 27 10.0
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 27 10.0
U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical pr... 27 10.0
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 27 10.0
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 27 10.0
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 27 10.0
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 27 10.0
AL132948-12|CAD31814.1| 283|Caenorhabditis elegans Hypothetical... 27 10.0
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 458 DELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 333
D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 723 DPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 458 DELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 333
D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 723 DPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 458 DELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 333
D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 723 DPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 458 DELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 333
D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 723 DPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 437 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGD-NSDG 279
++L H+SE+ TE S +GE+SG + + SG +G +G G+ NS G
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGSDNEASGEGSGEYDASGSSGDNSGEFNSSG 562
>AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 437 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGD-NSDG 279
++L H+SE+ TE S +GE+SG + + SG +G +G G+ NS G
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGSDNEASGEGSGEYDASGSSGDNSGEFNSSG 562
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Frame = +1
Query: 274 PKPSELSPIYLPVSPV--------MPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWD 429
P+ S SP Y P SP P P S T SG SP+S S PSS T+
Sbjct: 1673 PRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYS-PSSPTYS 1731
Query: 430 KT 435
T
Sbjct: 1732 PT 1733
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 274 PKPSELSPIYLPVSPV---MPVQPLTSLTL-TQTASGPETSPASDNLSVPSSDTWDKT 435
P S SP Y P SP PV P S T + + + P SP S + S P+S ++ T
Sbjct: 1587 PHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPT 1643
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Frame = +1
Query: 274 PKPSELSPIYLPVSPV--------MPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWD 429
P+ S SP Y P SP P P S T SG SP+S S PSS T+
Sbjct: 1680 PRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYS-PSSPTYS 1738
Query: 430 KT 435
T
Sbjct: 1739 PT 1740
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 274 PKPSELSPIYLPVSPV---MPVQPLTSLTL-TQTASGPETSPASDNLSVPSSDTWDKT 435
P S SP Y P SP PV P S T + + + P SP S + S P+S ++ T
Sbjct: 1594 PHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPT 1650
>U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein.
Length = 1404
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 175 VDDTDKSI--AILNVQEILKDMASQGDYAVKHQRWPKPSE 288
++D+D SI ++LN Q++LK + YA+ P+E
Sbjct: 254 LEDSDSSIVVSVLNKQQLLKTVKHPSIYAMSKMWISIPTE 293
Score = 23.0 bits (47), Expect(2) = 2.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 91 INQYSDNEIPRDIDDGKASSVISRAWDYVDDTD 189
INQ N + +DDG + V+ + Y+ D D
Sbjct: 205 INQMRSNLVTV-VDDGAQNPVVKKVISYLRDAD 236
>U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical
protein F35H10.10 protein.
Length = 1404
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 175 VDDTDKSI--AILNVQEILKDMASQGDYAVKHQRWPKPSE 288
++D+D SI ++LN Q++LK + YA+ P+E
Sbjct: 254 LEDSDSSIVVSVLNKQQLLKTVKHPSIYAMSKMWISIPTE 293
Score = 23.0 bits (47), Expect(2) = 2.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 91 INQYSDNEIPRDIDDGKASSVISRAWDYVDDTD 189
INQ N + +DDG + V+ + Y+ D D
Sbjct: 205 INQMRSNLVTV-VDDGAQNPVVKKVISYLRDAD 236
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +1
Query: 226 KDMASQGDYAVKHQRWPKPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLS 405
+D +Q A H P+ SP LP +P +P+T P +SPA +
Sbjct: 488 EDDGAQPSSAPVHTPPAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPSPVSSPAPQLVQ 547
Query: 406 VPSSDT 423
P++ T
Sbjct: 548 KPTTPT 553
>AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical
protein Y116A8C.4 protein.
Length = 714
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 400 DCLKPAKFPDLTPSV*ELMTLAAAQASPG 314
D +KPA DL PSV + M L A SPG
Sbjct: 286 DKMKPAVLDDLVPSV-DFMGLVKAMISPG 313
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 292 SPIYLPVSPVMPVQPLTSLTLTQTAS----GPETSPASDNLSVPSSDT 423
S IYLP V+P +S+ L+ T S P+T PAS +++ ++ T
Sbjct: 502 SSIYLPQPAYPEVKPNSSVILSSTQSQNNTSPQTIPASASVTNSATST 549
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 328 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTW 426
V P+T+ T SGP S N + SSD W
Sbjct: 846 VTPVTTTTTNMRESGPLLHENSHNQLLSSSDNW 878
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 328 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTW 426
V P+T+ T SGP S N + SSD W
Sbjct: 846 VTPVTTTTTNMRESGPLLHENSHNQLLSSSDNW 878
>Z48716-3|CAA88599.1| 96|Caenorhabditis elegans Hypothetical
protein F59B10.5 protein.
Length = 96
Score = 27.1 bits (57), Expect = 7.6
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 253 AVKHQRWPKPSELSPIYLPVSPVMPVQP 336
+V ++ +P P E++P Y+P+ V+P
Sbjct: 46 SVAYEDFPTPGEMTPKYVPIMDFAKVRP 73
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 7.6
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 313 SPVMPVQPLTSLTLTQTASGPETSPASDNLSV-PSSDTWDKT*ILSINSS*PWSTP 477
S V +P T+LT T TAS T P++ ++ PS+ T S +SS +TP
Sbjct: 421 STVTTTEPTTTLT-TSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTP 475
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 7.6
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 313 SPVMPVQPLTSLTLTQTASGPETSPASDNLSV-PSSDTWDKT*ILSINSS*PWSTP 477
S V +P T+LT T TAS T P++ ++ PS+ T S +SS +TP
Sbjct: 421 STVTTTEPTTTLT-TSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTP 475
>U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical
protein R08C7.6 protein.
Length = 569
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 271 WPKPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVP 411
+P P ++ P LPV + + S+ + + E P SD+ SVP
Sbjct: 341 YPDP-KMPPFVLPVETSVGCDNMNSVAIVHSEIDTEFRPMSDSQSVP 386
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 26.6 bits (56), Expect = 10.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 127 CRVEFHYHCID*W 89
C E+HYHCI W
Sbjct: 2126 CTREYHYHCISRW 2138
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 26.6 bits (56), Expect = 10.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 127 CRVEFHYHCID*W 89
C E+HYHCI W
Sbjct: 2126 CTREYHYHCISRW 2138
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 127 CRVEFHYHCID*W 89
CR FH HCID W
Sbjct: 100 CRHAFHRHCIDKW 112
>U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical
protein C06G3.6 protein.
Length = 498
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +1
Query: 109 NEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEIL 225
+++ R +++ KA+ +AW + DT+ + L++QE+L
Sbjct: 116 DDLGRTVNECKATMKSDKAWRVMKDTEIAEGQLSLQELL 154
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 271 WPKPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSP---ASDNLSVPS 414
W PS + +PVS + QPL S+ +T + ++P AS VPS
Sbjct: 57 WNDPSITTAPKIPVSLLSGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPS 107
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 271 WPKPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSP---ASDNLSVPS 414
W PS + +PVS + QPL S+ +T + ++P AS VPS
Sbjct: 57 WNDPSITTAPKIPVSLLSGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPS 107
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 271 WPKPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSP---ASDNLSVPS 414
W PS + +PVS + QPL S+ +T + ++P AS VPS
Sbjct: 57 WNDPSITTAPKIPVSLLSGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPS 107
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 271 WPKPSELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSP---ASDNLSVPS 414
W PS + +PVS + QPL S+ +T + ++P AS VPS
Sbjct: 57 WNDPSITTAPKIPVSLLSGAQPLPSVLTQRTTTSSYSAPNYSASSMSGVPS 107
>AL132948-12|CAD31814.1| 283|Caenorhabditis elegans Hypothetical
protein Y39B6A.16 protein.
Length = 283
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 352 LTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSS*PWSTPI 480
L + A P+T P S++L V SS + + ++ + S + TP+
Sbjct: 152 LAEQAPPPQTPPRSNSLKVASSRSLETPSMMRVFSDSMYETPV 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,398,461
Number of Sequences: 27780
Number of extensions: 238011
Number of successful extensions: 876
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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