Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1157
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   1.0  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.3  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   5.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   5.4  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   7.1  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   7.1  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    21   7.1  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    21   7.1  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 7/21 (33%), Positives = 18/21 (85%)
 Frame = -3

Query: 440 IQVLSHVSEEGTERLSEAGEV 378
           ++ +S+V ++GTE ++++G+V
Sbjct: 184 LESISYVKDDGTEGIAKSGDV 204


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 310 VSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSS 459
           V   + +QP   LTL++  S       S N +V   +  + T ILS++++
Sbjct: 466 VHDTLQIQPQEQLTLSKVTSNYHEEFQSLNNAVGEMEATNVTNILSMDNT 515


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 372 SGNFAGFRQSLGPFFGHVGQNLNLINQLVLTL 467
           +G +     ++G  FG+ G  +NL+   V T+
Sbjct: 269 AGIYGSNSSTVGTIFGYQGTYVNLVIVKVFTI 300



 Score = 21.0 bits (42), Expect = 7.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 366 VRSGNFAGFRQSLGPFFGHVGQNLNLINQLVLTLVNSD 479
           + S NF  F+++L  F G  G+  ++IN +   L   D
Sbjct: 46  LNSENFGIFKRALMGFQGVRGKKNSIINDVKNELFPED 83


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 442 LSINSS*PWSTPILWSD 492
           +++NS  P   P++WS+
Sbjct: 462 ITLNSKDPLDPPVIWSN 478


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 190 KSIAILNVQEILKDMASQGDYAVKHQR 270
           + I   ++  ILK + + G  +V HQR
Sbjct: 291 QQIVKFSLNSILKTVVAYGGTSVMHQR 317


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 366 VRSGNFAGFRQSLGPFFGHVGQNLNLINQLVLTLVNSD 479
           + S NF  F+++L  F G  G+  ++IN +   L   D
Sbjct: 46  LNSENFGIFKRALMGFQGVRGKKNSIINDVKNELFPED 83


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 366 VRSGNFAGFRQSLGPFFGHVGQNLNLINQLVLTLVNSD 479
           + S NF  F+++L  F G  G+  ++IN +   L   D
Sbjct: 47  LNSENFGIFKRALMGFQGVRGKKNSIINDVKNELFPED 84


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 366 VRSGNFAGFRQSLGPFFGHVGQNLNLINQLVLTLVNSD 479
           + S NF  F+++L  F G  G+  ++IN +   L   D
Sbjct: 46  LNSENFGIFKRALMGFQGVRGKKNSIINDVKNELFPED 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,205
Number of Sequences: 438
Number of extensions: 2880
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)