Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1155
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo...   102   5e-21
UniRef50_A2DPG0 Cluster: Putative uncharacterized protein; n=1; ...    32   6.2  
UniRef50_Q4RNC4 Cluster: Chromosome 2 SCAF15014, whole genome sh...    32   8.2  
UniRef50_Q18CM2 Cluster: Putative membrane protein precursor; n=...    32   8.2  
UniRef50_A4BU59 Cluster: Divalent cation transporter; n=1; Nitro...    32   8.2  

>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
            Ditrysia|Rep: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
            sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 3305

 Score =  102 bits (244), Expect = 5e-21
 Identities = 44/83 (53%), Positives = 61/83 (73%)
 Frame = +2

Query: 5    TVTYPTSSDSPYIFSGEACLDLDKKKQGHKTSVRYLINISNNRNQEAIAAEIGFFHPRLD 184
            T+T+PTS D P+   GEACLDLDK + GHKTS R+L++ SN+ +++   AEIGFFHP+++
Sbjct: 2157 TLTHPTSQDLPFPIKGEACLDLDKNRPGHKTSARFLVDYSNSGSEDKAVAEIGFFHPKIE 2216

Query: 185  KEVVIKSNAVFKVPEPNRYILES 253
            KE VI+ NA  K PE   + +ES
Sbjct: 2217 KEAVIRLNAFMKRPENGCFKIES 2239



 Score = 81.0 bits (191), Expect = 1e-14
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = +1

Query: 259  SLCHSSLGADRVSKLLLDVSPTKFVFLAQTPFVKVIDLEGTVDVQSKAKTQXAKLRFKLL 438
            SLCHS+LG DRV+K++ + +P    FLA TPFVK ID+EG+ +V  + +TQ    R  LL
Sbjct: 2242 SLCHSALGTDRVAKVMFETTPNSVKFLADTPFVKAIDVEGSFNVNQQQRTQQCLFRICLL 2301

Query: 439  EGKEVSVQALAK 474
            EGK V + AL K
Sbjct: 2302 EGKPVQMSALVK 2313


>UniRef50_A2DPG0 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1122

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +2

Query: 41   IFSGEACLD-LDKKKQGHKTSVRYLINISNNRNQEAIAAEIGFFHPRLDKEVVIKSNAVF 217
            +FS + C+D L+KK Q H+ S  +  N SN ++ + I   I     +  KE+ I++++  
Sbjct: 780  LFSQD-CIDKLNKKPQKHQVSQPHGKN-SNPKSIQRIKDRISDQKFQSQKEITIETDSYI 837

Query: 218  KVPEPNRYILES*SAYVTPLSALIASPN 301
             +P      L S  + +TP  A   +PN
Sbjct: 838  NIPIEKSNSLTSFDSILTPPPAFGNNPN 865


>UniRef50_Q4RNC4 Cluster: Chromosome 2 SCAF15014, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 2 SCAF15014, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 2383

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 110 GI*QRSCVPVSSYPGRGRPLR*IYTES 30
           GI + SC P  SYPG  RP++ I TES
Sbjct: 497 GIGELSCEPQQSYPGGHRPVQVIITES 523


>UniRef50_Q18CM2 Cluster: Putative membrane protein precursor; n=5;
           Clostridium difficile|Rep: Putative membrane protein
           precursor - Clostridium difficile (strain 630)
          Length = 365

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 22/60 (36%), Positives = 28/60 (46%)
 Frame = +1

Query: 253 IVSLCHSSLGADRVSKLLLDVSPTKFVFLAQTPFVKVIDLEGTVDVQSKAKTQXAKLRFK 432
           IVSL   SLG  R+SK+L ++ P   +F   T  V  I L   +D  S A      L  K
Sbjct: 129 IVSLITVSLGLTRLSKILGNIGPIIIIF---TLLVGAISLFSNIDALSNAGNMVDSLNIK 185


>UniRef50_A4BU59 Cluster: Divalent cation transporter; n=1;
           Nitrococcus mobilis Nb-231|Rep: Divalent cation
           transporter - Nitrococcus mobilis Nb-231
          Length = 442

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 217 QGPGTKSIYSRIIVSLCHSSLGADRVSKLLLDVSPTKFVFLAQTPFVKV 363
           Q PGT++IY   +V   H  +G+ R+  L+L    T    L ++  V V
Sbjct: 154 QAPGTETIYRSYVVDRDHRLMGSVRLHALILSADDTPITDLMESAPVSV 202


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,651,925
Number of Sequences: 1657284
Number of extensions: 10428152
Number of successful extensions: 27406
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27400
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)