Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1148
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    59   4e-11
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    30   0.016
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    25   0.79 
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   1.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.2  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.7  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 58.8 bits (136), Expect = 4e-11
 Identities = 27/71 (38%), Positives = 49/71 (69%)
 Frame = +1

Query: 34  YLKGHQLEDVDVDDLMRRYTNDVIASAGFGLQVNSLVDKDNEFYECGQAMFSTSWPQRFK 213
           + +G + +DV++ ++  R++NDVIA+A FG++VNS+ + +NEFY  G+++ + S  Q  K
Sbjct: 117 FFQGRE-QDVEIKEVFSRFSNDVIATAAFGIRVNSVQEPNNEFYAMGRSLTTFSAFQILK 175

Query: 214 MILAAQFPTLA 246
           + LA   P +A
Sbjct: 176 IFLAHLVPKIA 186



 Score = 58.8 bits (136), Expect = 4e-11
 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
 Frame = +3

Query: 261 KVFPQKVTRFFREIVTSTMDYRLKNNVERPDMIQLLMDAYKGTLKNESNESDEKNVGFAM 440
           +V P+KVT FF  ++   M  R    + RPD+I LLM+A KG LK+++  S+E   GFA 
Sbjct: 192 RVLPRKVTDFFEGLILDNMQKREAEKIVRPDLIHLLMEARKGKLKHDN--SNEGGEGFAT 249

Query: 441 TEEMLKPKGNVR-KWTQDELTAQVSSSSLRDLKARLMV*RFAFTXSHWNPEAQEKLYEAI 617
            EE    K   + + T +++ AQ         +       F       NP  Q+KL + I
Sbjct: 250 VEESEIGKNTKQVELTDEKIVAQALLFFFAGFETVSTGVSFMAYELATNPHVQKKLQKEI 309

Query: 618 -IKFQEEKDR*PTXTLEDXNTLD 683
            +  QE   +     L+    LD
Sbjct: 310 DLTLQENHGKISYNVLQSMKYLD 332


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +1

Query: 31  QYLKGHQLEDVDVDDLMRRYTNDVIASAGFGLQVNSLVDKDNE 159
           ++L+ H  E++DV   M++Y+ D+I++  FG+      + ++E
Sbjct: 155 RFLEDHT-EEIDVKTAMKKYSVDIISTCAFGINTYCFRNDNSE 196


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +3

Query: 582 NPEAQEKLY-EAIIKFQEEK 638
           NPEAQEK Y E +  F +EK
Sbjct: 15  NPEAQEKAYEEQVALFGKEK 34


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 558 FAFTXSHWNPEAQEKLYEAI 617
           FA      NP+ QEKLYE +
Sbjct: 7   FAILCLAENPKVQEKLYEEV 26


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = -3

Query: 237 WKLCSQYHFKSLWPTCAKHCLTTLV 163
           W +   YH   LW   + +C   L+
Sbjct: 246 WTIYEMYHLAILWSCTSTNCPRFLI 270


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 288 NELLFVEILLF 256
           NEL+F E+LLF
Sbjct: 144 NELVFSEVLLF 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,364
Number of Sequences: 336
Number of extensions: 3044
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)