Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1148
         (698 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15679| Best HMM Match : p450 (HMM E-Value=1.9e-37)                  36   0.024
SB_1738| Best HMM Match : p450 (HMM E-Value=0)                         35   0.055
SB_59709| Best HMM Match : p450 (HMM E-Value=8e-16)                    35   0.055
SB_34556| Best HMM Match : p450 (HMM E-Value=0)                        31   0.90 
SB_36294| Best HMM Match : 7tm_1 (HMM E-Value=6.6e-08)                 31   1.2  
SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_13025| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_56677| Best HMM Match : p450 (HMM E-Value=1.1e-10)                  28   6.3  
SB_51175| Best HMM Match : p450 (HMM E-Value=0)                        28   6.3  
SB_2899| Best HMM Match : Spectrin (HMM E-Value=0.2)                   28   8.4  
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.4  
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)              28   8.4  

>SB_15679| Best HMM Match : p450 (HMM E-Value=1.9e-37)
          Length = 492

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 61  VDVDDLMRRYTNDVIASAGFGLQVNSLVDKDNEFYEC-GQAMFSTSW 198
           +D++D ++R   D++    FG+++NS+ D +  FY    ++  +T W
Sbjct: 187 IDMEDFVKRMALDIMGKVAFGIKINSIEDPNTPFYTALEESRSATHW 233


>SB_1738| Best HMM Match : p450 (HMM E-Value=0)
          Length = 484

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +1

Query: 55  EDVDVDDLMRRYTNDVIASAGFGLQVNSLVDKDNEFYECGQAMFSTS-WPQRFKMILAAQ 231
           E  D  +L   +  DVI  + FG++ +   D D+ FY+  +  F T  W + F M   ++
Sbjct: 162 ESTDCVNLFSLFALDVITISAFGVETDIQTDPDSSFYKLAKKAFRTPIWVRAFSMFPFSE 221

Query: 232 F 234
           +
Sbjct: 222 Y 222


>SB_59709| Best HMM Match : p450 (HMM E-Value=8e-16)
          Length = 377

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +1

Query: 55  EDVDVDDLMRRYTNDVIASAGFGLQVNSLVDKDNEFYECGQAMFSTS-WPQRFKMILAAQ 231
           E  D  +L   +  DVI  + FG++ +   D D+ FY+  +  F T  W + F M   ++
Sbjct: 66  ESTDCVNLFSLFALDVITISAFGVETDIQTDPDSSFYKLAKKAFRTPIWVRAFSMFPFSE 125

Query: 232 F 234
           +
Sbjct: 126 Y 126


>SB_34556| Best HMM Match : p450 (HMM E-Value=0)
          Length = 408

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +1

Query: 55  EDVDVDDLMRRYTNDVIASAGFGLQVNSLVDKDNEFYECGQAMFS-TSWPQRFKMILAAQ 231
           E VD   L   +  +VI SA FG   +     D EF    + +F+  +W + F MI  A 
Sbjct: 89  ESVDCIRLFSLFALEVIMSAAFGYHADVQTAPDEEFVAKARNVFAIPAWRRFFSMIPFAD 148

Query: 232 F 234
           F
Sbjct: 149 F 149


>SB_36294| Best HMM Match : 7tm_1 (HMM E-Value=6.6e-08)
          Length = 353

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +3

Query: 435 AMTEEMLKPKGNVRKWTQDELTAQVSSSSLRDLKARLMV*RFAFTXSHWNPEAQEKLYEA 614
           +MT    +  G+  + T+D  +AQV S+ L    A +MV  F F    W P A   +Y A
Sbjct: 206 SMTHNAARTWGSDAQGTRDTFSAQVRSARL----AFMMVLAFVFA---WTPYAVVSIYSA 258

Query: 615 IIK 623
           ++K
Sbjct: 259 LLK 261


>SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3610

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +3

Query: 300  IVTSTMDYRLKNNVERPDMIQLLMDAYKGTLKNESNESDEKNVGFAMT 443
            + +S +DY   NN E  D  +  +D  +GT++N      E+   +++T
Sbjct: 1693 VTSSKLDYESVNNYELQDYQKFTIDTQRGTIRNAVVFDREEESRYSLT 1740


>SB_13025| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 123

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 58  DVDVDDLMRRYTNDVIASAGFGLQVNSLVDKDNEF 162
           +V + D   + T DVI   GF + VNS+ D+++ F
Sbjct: 31  EVRMADEFAKVTLDVIGKVGFNIDVNSIGDENSPF 65


>SB_56677| Best HMM Match : p450 (HMM E-Value=1.1e-10)
          Length = 606

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 73  DLMRRYTNDVIASAGFGLQVNSLVDKDNEF 162
           D   R T DVI    F L + +L DKD+ F
Sbjct: 100 DQFHRITMDVIMKVAFSLDLKTLDDKDSTF 129


>SB_51175| Best HMM Match : p450 (HMM E-Value=0)
          Length = 408

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +1

Query: 55  EDVDVDDLMRRYTNDVIASAGFGLQVNSLVDKDNEFYECGQAMFSTSWPQRFKMILAAQF 234
           + VDV     ++T + I S  FG+   +  + +++F    Q  F    P  F  ILA  F
Sbjct: 82  KSVDVCRTYVKFTMETIVSTAFGIDCQTQTNPNDQFLSNAQRYFGK--PSPF-TILAVLF 138

Query: 235 PTL 243
           P L
Sbjct: 139 PYL 141


>SB_2899| Best HMM Match : Spectrin (HMM E-Value=0.2)
          Length = 139

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +3

Query: 285 RFFREIVTSTMDYRLKNNVERPDMIQLL----MDAYKGTLKNESN 407
           + F E V S +D RLKN  +  DM+       MD YKG  + ES+
Sbjct: 30  KHFTEAV-SVLDRRLKNKFDEIDMLMKAGADSMDVYKGLKRLESD 73


>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2509

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +3

Query: 285  RFFREIVTSTMDYRLKNNVERPDMIQLL----MDAYKGTLKNESN 407
            + F E V S +D RLKN  +  DM+       MD YKG  + ES+
Sbjct: 2349 KHFTEAV-SVLDRRLKNKFDEIDMLMKAGADSMDVYKGLKRLESD 2392


>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
          Length = 3397

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +3

Query: 285 RFFREIVTSTMDYRLKNNVERPDMIQLL----MDAYKGTLKNESN 407
           + F E V S +D RLKN  +  DM+       MD YKG  + ES+
Sbjct: 57  KHFTEAV-SVLDRRLKNKFDEIDMLMKAGADSMDVYKGLKRLESD 100


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,536,937
Number of Sequences: 59808
Number of extensions: 381735
Number of successful extensions: 948
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)