Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1148
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    44   1e-06
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    23   2.1  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    23   2.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.4  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 19/63 (30%), Positives = 37/63 (58%)
 Frame = +1

Query: 55  EDVDVDDLMRRYTNDVIASAGFGLQVNSLVDKDNEFYECGQAMFSTSWPQRFKMILAAQF 234
           E ++  +L  R+T DVI S  FG+ ++S+ ++++EF   G+ +F+ ++    +M L    
Sbjct: 170 EPIECRELTARFTTDVIGSCAFGIDMSSMTNENSEFRRMGREVFAVNFMNVMRMKLKQFM 229

Query: 235 PTL 243
           P L
Sbjct: 230 PRL 232



 Score = 41.1 bits (92), Expect = 1e-05
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +3

Query: 288 FFREIVTSTMDYRLKNNVERPDMIQLLMDAYKGTLKNES 404
           FF  +VT T+ YR  NN+ RPD I +LM+  K   K E+
Sbjct: 248 FFTRVVTDTIKYRNDNNIVRPDFINMLMELQKNPQKLEN 286



 Score = 30.7 bits (66), Expect = 0.014
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +2

Query: 506 SFIFFLAGFESSANGLTLCIHXLAL 580
           +F+FFLAGFE+S+  ++  ++ LAL
Sbjct: 298 AFVFFLAGFETSSTTMSNALYELAL 322


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 351 DMIQLLMDAYKGTLKNESNESDEKNVGFAMTE 446
           D IQL+       ++N   E+DE N+G   T+
Sbjct: 103 DDIQLVKGIANECIENAKGETDECNIGNKYTD 134


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 351 DMIQLLMDAYKGTLKNESNESDEKNVGFAMTE 446
           D IQL+       ++N   E+DE N+G   T+
Sbjct: 103 DDIQLVKGIANECIENAKGETDECNIGNKYTD 134


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 506 SFIFFLAGFESSANGLTLCI 565
           SF+F +A  +SS    T+C+
Sbjct: 19  SFLFVIAAQDSSGRIFTICV 38


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 506 SFIFFLAGFESSANGLTLCI 565
           SF+F +A  +SS    T+C+
Sbjct: 19  SFLFVIAAQDSSGRIFTICV 38


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 506 SFIFFLAGFESSANGLTLCI 565
           SF+F +A  +SS    T+C+
Sbjct: 19  SFLFVIAAQDSSGRIFTICV 38


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 597 PELQDSSASX*MQSVRPLAELSNPARKKMKLVR 499
           PEL +      +Q +RPLA L      +++LV+
Sbjct: 353 PELNEEFRDLRLQDLRPLATLGVGGFGRVELVQ 385


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,073
Number of Sequences: 438
Number of extensions: 4067
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)