Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1148
         (698 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical t...    31   0.97 
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ...    29   3.0  
At4g30780.1 68417.m04361 expressed protein hypothetical protein ...    29   3.9  
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont...    28   5.2  
At4g13770.1 68417.m02136 cytochrome P450 family protein                27   9.0  
At3g55020.1 68416.m06110 RabGAP/TBC domain-containing protein lo...    27   9.0  
At3g14205.1 68416.m01795 phosphoinositide phosphatase family pro...    27   9.0  
At1g75380.3 68414.m08757 wound-responsive protein-related simila...    27   9.0  
At1g75380.2 68414.m08756 wound-responsive protein-related simila...    27   9.0  
At1g75380.1 68414.m08755 wound-responsive protein-related simila...    27   9.0  

>At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical to
           fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
           GI:2905893
          Length = 687

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 18/74 (24%), Positives = 34/74 (45%)
 Frame = +3

Query: 156 RILRVWSSNV*HKLATEI*NDIGCTVSNVSQENGIKVFPQKVTRFFREIVTSTMDYRLKN 335
           R+L  W  N  H L       +GC+V N+  ++  +  P  V     +++   +   L N
Sbjct: 187 RVLNPWERNENHTLCLNSAKAVGCSVVNIGTQDLAEGRPHLVLGLISQLIKIQVLADL-N 245

Query: 336 NVERPDMIQLLMDA 377
             + P +++LL D+
Sbjct: 246 LKKTPQLVELLEDS 259


>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
           fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
           GI:2905893; contains Pfam profile PF00307: Calponin
           homology (CH) domain
          Length = 714

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = +3

Query: 156 RILRVWSSNV*HKLATEI*NDIGCTVSNVSQENGIKVFPQKVTRFFREIVTSTM--DYRL 329
           R+L  W  N  H L       +GC+V N+  ++  +  P  V     +++   +  D  L
Sbjct: 188 RVLNPWERNENHTLCLNSAKAVGCSVVNIGTQDLAEGRPHLVLGLISQLIKIQLLADLSL 247

Query: 330 KNNVERPDMIQLLMD 374
           K   + P +++L+ D
Sbjct: 248 K---KMPQLVELVED 259


>At4g30780.1 68417.m04361 expressed protein hypothetical protein
           F27D4.1 -  Arabidopsis thaliana,PID:g4115371
          Length = 589

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 432 NLHFFRLIRCSHS*ESLYKHPSVAESYPVFLRCSSIY 322
           N HF +L++C H    L + P +A   P F    SI+
Sbjct: 258 NKHFEKLVQCDHRLFHLSRQPEIAIDSPYFDARQSIF 294


>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
           contains weak similarity to cytoplasmic linker protein
           CLIP-170 (GI:2905649) [Gallus gallus]
          Length = 588

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
 Frame = +3

Query: 324 RLKNNVERPDMIQLLMDAYKGTLKNESNESDEKNVGFAMTEEMLK----------PKGNV 473
           +L+NN    +  ++L+  Y+   + ESNE DE+        E L+           +GNV
Sbjct: 312 KLQNNPADLENHEILLKDYESLRRGESNEMDEEVSSLRCEVERLRAALEASDKKDQEGNV 371

Query: 474 ----RKWTQDELTAQ--VSSSSLRDLKARLM 548
               R   Q EL ++  ++ S + +LKARLM
Sbjct: 372 EASSRLRIQAELQSELKIAKSEIDELKARLM 402


>At4g13770.1 68417.m02136 cytochrome P450 family protein
          Length = 502

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 55  EDVDVDDLMRRYTNDVIASAGFGLQVN 135
           E VD+ +LM  +TN V+    FG + N
Sbjct: 166 EVVDISELMLTFTNSVVCRQAFGKKYN 192


>At3g55020.1 68416.m06110 RabGAP/TBC domain-containing protein low
           similarity to SP|Q9BXI6 EBP50-PDZ interactor of 64 kDa
           (EPI64 protein) {Homo sapiens}; contains Pfam profile
           PF00566: TBC domain
          Length = 777

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = -3

Query: 564 MQSVRPLAELSNPARKKMKLVRSVRLGSIFLHSPLVLTSLLS*QNLHFFRL--IRCSH 397
           M+   P    +  A   + L++S+  GS F  S LVLT+ +  QN+H  RL  +R  H
Sbjct: 465 MELYGPALVTTKDAGDAVTLLQSLT-GSTFDSSQLVLTACMGYQNVHEIRLQELRSKH 521


>At3g14205.1 68416.m01795 phosphoinositide phosphatase family
           protein contains similarity to phosphoinositide
           phosphatase SAC1 [Rattus norvegicus]
           gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
           SacI homology domain;  identical to SAC domain protein 2
           (SAC2) GI:31415720
          Length = 808

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = -2

Query: 592 ASGFQCEXVNAKRQTISRAF----KSRKEEDETCAVSS 491
           +SG  CE  +  R T+ R+F    +SRK E E C V +
Sbjct: 736 SSGNSCEDESCGRATVVRSFETIPESRKIESEICVVET 773


>At1g75380.3 68414.m08757 wound-responsive protein-related similar
           to wound inducive gene GI:8096273 from [Nicotiana
           tabacum]
          Length = 325

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -1

Query: 347 SFYVVLQSIIHSAGHD--LSKETSYFLWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 177
           + Y V++ ++   G++  L + T      YF  +FL+ VGN +  +  +L     +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231


>At1g75380.2 68414.m08756 wound-responsive protein-related similar
           to wound inducive gene GI:8096273 from [Nicotiana
           tabacum]
          Length = 325

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -1

Query: 347 SFYVVLQSIIHSAGHD--LSKETSYFLWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 177
           + Y V++ ++   G++  L + T      YF  +FL+ VGN +  +  +L     +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231


>At1g75380.1 68414.m08755 wound-responsive protein-related similar
           to wound inducive gene GI:8096273 from [Nicotiana
           tabacum]
          Length = 325

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -1

Query: 347 SFYVVLQSIIHSAGHD--LSKETSYFLWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 177
           + Y V++ ++   G++  L + T      YF  +FL+ VGN +  +  +L     +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,895,056
Number of Sequences: 28952
Number of extensions: 272482
Number of successful extensions: 736
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)