Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1147
(279 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 126 3e-30
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 125 4e-30
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 124 1e-29
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 121 9e-29
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 121 9e-29
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 118 5e-28
03_01_0034 + 318432-318825,318902-319851 117 2e-27
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 114 8e-27
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 60 3e-10
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 59 6e-10
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 56 3e-09
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 50 2e-07
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 43 4e-05
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 33 0.025
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 33 0.033
10_01_0300 - 3257584-3258825 32 0.075
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 31 0.13
08_02_0235 + 14627648-14628889 31 0.13
08_01_0749 + 7063297-7064370 31 0.13
07_01_1086 - 9930311-9931993 31 0.13
05_03_0216 + 10370531-10371922,10378656-10378808 31 0.13
04_01_0187 - 2153546-2154520,2154581-2155858 31 0.13
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 30 0.30
10_04_0010 - 7487455-7489490,7489569-7489980 30 0.30
03_02_1029 - 13488535-13493037 30 0.30
02_04_0648 - 24716249-24717841 28 0.93
04_04_0178 - 23337801-23337896,23337999-23338067,23338171-233382... 28 1.2
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 27 1.6
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 27 1.6
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 26 4.9
07_03_1330 + 25848372-25849157 26 4.9
01_01_0285 - 2360799-2362631 26 4.9
11_01_0232 + 1794081-1795175,1796087-1796782 25 6.5
07_03_1416 - 26415330-26417153 25 8.6
05_06_0110 + 25632514-25632834,25633200-25634039 25 8.6
04_04_0759 - 27832340-27832480,27832568-27832593,27832759-27834154 25 8.6
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 25 8.6
02_01_0417 - 3048519-3048710,3048903-3050600,3050622-3050909,305... 25 8.6
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 126 bits (303), Expect = 3e-30
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDSDLQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 125 bits (302), Expect = 4e-30
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I DEHG+D TG Y GDSDLQLERINVYYNEASGG+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 124 bits (299), Expect = 1e-29
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDSDLQLERINVYYNEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 121 bits (291), Expect = 9e-29
Identities = 51/64 (79%), Positives = 58/64 (90%)
Frame = +1
Query: 64 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKY 243
KMREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SDLQLER+NVYYNEAS G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 244 VPRA 255
VPRA
Sbjct: 240 VPRA 243
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 121 bits (291), Expect = 9e-29
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 118 bits (285), Expect = 5e-28
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 117 bits (281), Expect = 2e-27
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y GDSDLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 114 bits (275), Expect = 8e-27
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I EHG+DPTG Y G S QLERINVY+NEASGG++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 59.7 bits (138), Expect = 3e-10
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI+P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 58.8 bits (136), Expect = 6e-10
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ IQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RA 255
RA
Sbjct: 63 RA 64
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 56.4 bits (130), Expect = 3e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 50.4 bits (115), Expect = 2e-07
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 42.7 bits (96), Expect = 4e-05
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS 186
MREI+ I GQ G Q+G WE+ EHGI P G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
Score = 26.6 bits (56), Expect = 2.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 199 ERINVYYNEASGGKYVPRA 255
+ N +++E S GK+VPRA
Sbjct: 107 DAFNTFFSETSSGKHVPRA 125
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 33.5 bits (73), Expect = 0.025
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q +KFW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 33.1 bits (72), Expect = 0.033
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q +KFW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>10_01_0300 - 3257584-3258825
Length = 413
Score = 31.9 bits (69), Expect = 0.075
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 31.1 bits (67), Expect = 0.13
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 289 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 326
>08_02_0235 + 14627648-14628889
Length = 413
Score = 31.1 bits (67), Expect = 0.13
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 158
>08_01_0749 + 7063297-7064370
Length = 357
Score = 31.1 bits (67), Expect = 0.13
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q +KFW+ + E G ++ + AYH +D Q ER+N
Sbjct: 65 GSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERVN 102
>07_01_1086 - 9930311-9931993
Length = 560
Score = 31.1 bits (67), Expect = 0.13
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 268 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 305
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 31.1 bits (67), Expect = 0.13
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 254 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 291
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 31.1 bits (67), Expect = 0.13
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 504 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 541
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 29.9 bits (64), Expect = 0.30
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 406 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 443
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 29.9 bits (64), Expect = 0.30
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 568 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 605
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 29.9 bits (64), Expect = 0.30
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG--IDPTGAYHGDSDLQLERIN 210
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 1208 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 1245
>02_04_0648 - 24716249-24717841
Length = 530
Score = 28.3 bits (60), Expect = 0.93
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 115 GAKFWEIISDEHGIDPTGAYHG 180
G +++E++ DEHGI+P ++G
Sbjct: 366 GLRYFELMCDEHGIEPEIEHYG 387
>04_04_0178 -
23337801-23337896,23337999-23338067,23338171-23338253,
23338694-23338772,23338956-23339120,23339230-23339274,
23339370-23339444,23340135-23340311,23340398-23340721,
23340829-23340897
Length = 393
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -1
Query: 258 GCAGHVLAAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDL 130
G G +A G IVV L + V GV AVLVG+ L
Sbjct: 327 GERGQTIAQKGIIVVGESGLFTPDHISFVQNAGVKAVLVGESL 369
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 156
MRE V +Q G N +G+ FW + G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 156
MRE V +Q G N +G+ FW + G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = -1
Query: 255 CAGHVLAAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDM 82
C G+ +A ++V+I + L + + G AVL+ DD + + +A+ L +
Sbjct: 525 CLGYGIAIAVGVLVFISTVMLASYICVRAKAGAAAVLLADDDDDGGAPAASAVVVLGL 582
>07_03_1330 + 25848372-25849157
Length = 261
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 136 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRASSSTWSPA 279
++D+ +DP + D + R+N+ S R S+ST SP+
Sbjct: 195 LTDQRFVDPFNTSNKTPDAEETRVNLIPANTSATASTSRPSTSTSSPS 242
>01_01_0285 - 2360799-2362631
Length = 610
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/44 (22%), Positives = 20/44 (45%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE 201
R + H G + W +++ H +DP + G+S L ++
Sbjct: 525 RAVAHATRMATGGEFITILWALLTHAHVVDPLQSRGGNSGLHMQ 568
>11_01_0232 + 1794081-1795175,1796087-1796782
Length = 596
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 255 CAGHVLAAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDD 133
C G+ +A ++V+I + L + + G AVL+ DD
Sbjct: 446 CLGYGIAIAVGVLVFISTVMLASYICVRAKAGAAAVLLADD 486
>07_03_1416 - 26415330-26417153
Length = 607
Score = 25.0 bits (52), Expect = 8.6
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 115 GAKFWEIISDEHGIDPTGAYHG 180
G K++ +++ HGI+PT ++G
Sbjct: 355 GKKYFRSMNEVHGIEPTVEHYG 376
>05_06_0110 + 25632514-25632834,25633200-25634039
Length = 386
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 191 CSWSASMYTTMKPPAASTCPA 253
CSWS+ + PPA+ PA
Sbjct: 185 CSWSSRLMVLPPPPASPPSPA 205
>04_04_0759 - 27832340-27832480,27832568-27832593,27832759-27834154
Length = 520
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 215 TTMKPPAASTCPAHPRRLGAR 277
+ + PAA CPAH +R AR
Sbjct: 311 SAQRAPAACNCPAHVQRPQAR 331
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 162 GVDAVLVGDDLPELSSDLVAA 100
GV + L+G L +LSSDLVAA
Sbjct: 6 GVASWLLGKVLTQLSSDLVAA 26
>02_01_0417 -
3048519-3048710,3048903-3050600,3050622-3050909,
3052308-3052377,3052417-3052668,3053235-3055297
Length = 1520
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 196 LERINVYYNEASGGKYVPRASSST 267
L R+N+ YN SGG V SSS+
Sbjct: 847 LSRLNLSYNSLSGGLPVELMSSSS 870
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,962,027
Number of Sequences: 37544
Number of extensions: 151842
Number of successful extensions: 504
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 267635896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -