Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1147
(279 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 124 1e-29
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 121 8e-29
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 120 1e-28
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 120 1e-28
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 120 2e-28
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 119 3e-28
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 117 1e-27
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 115 5e-27
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 114 7e-27
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 60 3e-10
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 59 5e-10
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 59 5e-10
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 58 7e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 58 7e-10
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 56 3e-09
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 56 3e-09
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 54 1e-08
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 54 1e-08
At4g37190.1 68417.m05265 expressed protein 31 0.15
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 29 0.35
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 1.1
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 1.4
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 1.9
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 2.4
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 27 2.4
At4g01430.2 68417.m00184 nodulin MtN21 family protein similar to... 26 3.2
At4g01430.1 68417.m00183 nodulin MtN21 family protein similar to... 26 3.2
At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide pyr... 26 4.3
At3g07470.1 68416.m00891 expressed protein contains Pfam profile... 26 4.3
At1g68390.1 68414.m07813 expressed protein contains Pfam profile... 26 4.3
At5g66280.1 68418.m08357 GDP-D-mannose 4,6-dehydratase, putative... 25 5.7
At3g13050.1 68416.m01626 transporter-related low similarity to a... 25 5.7
At2g35620.1 68415.m04368 leucine-rich repeat transmembrane prote... 25 5.7
At2g23080.2 68415.m02751 casein kinase II alpha chain, putative ... 25 7.5
At2g23080.1 68415.m02752 casein kinase II alpha chain, putative ... 25 7.5
At3g15830.1 68416.m02003 phosphatidic acid phosphatase-related /... 25 9.9
At2g28220.1 68415.m03426 aspartyl protease family protein contai... 25 9.9
At2g07360.1 68415.m00843 SH3 domain-containing protein contains ... 25 9.9
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 124 bits (298), Expect = 1e-29
Identities = 53/64 (82%), Positives = 60/64 (93%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 243
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 244 VPRA 255
VPRA
Sbjct: 61 VPRA 64
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 121 bits (291), Expect = 8e-29
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 120 bits (289), Expect = 1e-28
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 120 bits (289), Expect = 1e-28
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 120 bits (288), Expect = 2e-28
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 119 bits (287), Expect = 3e-28
Identities = 53/64 (82%), Positives = 58/64 (90%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 243
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 244 VPRA 255
VPRA
Sbjct: 61 VPRA 64
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 117 bits (282), Expect = 1e-27
Identities = 52/63 (82%), Positives = 56/63 (88%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 115 bits (276), Expect = 5e-27
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 114 bits (275), Expect = 7e-27
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 59.7 bits (138), Expect = 3e-10
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 58.8 bits (136), Expect = 5e-10
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 58.8 bits (136), Expect = 5e-10
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.4 bits (135), Expect = 7e-10
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RA 255
RA
Sbjct: 63 RA 64
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.4 bits (135), Expect = 7e-10
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RA 255
RA
Sbjct: 63 RA 64
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 56.4 bits (130), Expect = 3e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 56.4 bits (130), Expect = 3e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 54.0 bits (124), Expect = 1e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 54.0 bits (124), Expect = 1e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 0.15
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 156
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 29.5 bits (63), Expect = 0.35
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = -1
Query: 270 PSRRGCAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAAL 97
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S D VA L
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
Query: 96 ------TSLDMYDFPHFVL 58
+ +YD H VL
Sbjct: 64 LKSAKIRNTRIYDADHSVL 82
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 237 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 58
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 73 EIVHIQAGQCGNQIGAKFWEIISD 144
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 1.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 88 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 180
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 115 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
G + W I+ + TG Y DL ER+++ +++A +Y P
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKP 89
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 167 PVGSMPCSSEMISQNLAPIW 108
PVG C SE ++Q L +W
Sbjct: 655 PVGKEVCDSERVTQGLGAVW 674
>At4g01430.2 68417.m00184 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 305
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 176 MGTLTCSWSASMYTTMKPPAASTCPAHPR 262
MGTL C A + T K P S +HP+
Sbjct: 78 MGTLICIMGAMLLTFYKGPELSNPHSHPQ 106
>At4g01430.1 68417.m00183 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 365
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 176 MGTLTCSWSASMYTTMKPPAASTCPAHPR 262
MGTL C A + T K P S +HP+
Sbjct: 138 MGTLICIMGAMLLTFYKGPELSNPHSHPQ 166
>At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide
pyrophosphatase family protein similar to SP|P22413
Ectonucleotide pyrophosphatase/phosphodiesterase 1
(Plasma-cell membrane glycoprotein PC-1) [Includes:
Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide
pyrophosphatase (EC 3.6.1.9) {Homo sapiens}; contains
Pfam profile PF01663: Type I phosphodiesterase /
nucleotide pyrophosphatase
Length = 457
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 152 PCSSEMISQNLAPIWLPH*PAWICTIS 72
P S E+ ++NL P W P W+ ++
Sbjct: 126 PVSGELFNRNLNPKWWLGEPLWVTAVN 152
>At3g07470.1 68416.m00891 expressed protein contains Pfam profile
PF04398: Protein of unknown function, DUF538
Length = 169
Score = 25.8 bits (54), Expect = 4.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 151 GIDPTGAYHGDSDLQLERINVYYNEASGGKY 243
GI P G D++ R +VY N+A KY
Sbjct: 43 GIFPKGVREFTFDVETGRFSVYLNQACEAKY 73
>At1g68390.1 68414.m07813 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function,
DUF266; expression supported by MPSS
Length = 408
Score = 25.8 bits (54), Expect = 4.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 81 TYPSWSMRQPDRS*VLGDHLRRARHRPHRCLPWGL*LAVGAHQCIL 218
+YPS++ P+ D + R RH P + + WG V A Q +L
Sbjct: 172 SYPSYNQSDPE------DSVFRGRHIPSKRVDWGYVNMVEAEQRLL 211
>At5g66280.1 68418.m08357 GDP-D-mannose 4,6-dehydratase, putative
strong similarity to GDP-D-mannose-4,6-dehydratase
[Arabidopsis thaliana] GI:1764100
Length = 361
Score = 25.4 bits (53), Expect = 5.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 200 SASMYTTMKPPAASTCPAHPR 262
S+ M+ + PP + T P HPR
Sbjct: 150 SSEMFGSTPPPQSETTPFHPR 170
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 25.4 bits (53), Expect = 5.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 103 GNQIGAKFWEIISDEHG 153
G IGA W I+SD+HG
Sbjct: 72 GMLIGAYSWGIVSDKHG 88
>At2g35620.1 68415.m04368 leucine-rich repeat transmembrane protein
kinase, putative similar to somatic embryogenesis
receptor-like kinase 1 (SERK1) [Zea mays]
gi|13897318|emb|CAC37640; contains leucine rich repeat
(LRR) domains, Pfam:PF00560; contains protein kinase
domain, Pfam:PF00069
Length = 589
Score = 25.4 bits (53), Expect = 5.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 231 GGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLD 85
G F+ + ++ + V VG GG V+ DLP S D++ L SL+
Sbjct: 258 GCFLYKKLGRVESKSLVIDVG-GGASIVMFHGDLPYASKDIIKKLESLN 305
>At2g23080.2 68415.m02751 casein kinase II alpha chain, putative
identical to probable casein kinase II, alpha chain
[Arabidopsis thaliana] SWISS-PROT:O64817; similar to
casein kinase II, alpha chain 1 [Arabidopsis thaliana]
SWISS-PROT:Q08467
Length = 307
Score = 25.0 bits (52), Expect = 7.5
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 55 K*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPT 165
K K++ + I CG K ++I+ DEH P+
Sbjct: 69 KKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPS 105
>At2g23080.1 68415.m02752 casein kinase II alpha chain, putative
identical to probable casein kinase II, alpha chain
[Arabidopsis thaliana] SWISS-PROT:O64817; similar to
casein kinase II, alpha chain 1 [Arabidopsis thaliana]
SWISS-PROT:Q08467
Length = 333
Score = 25.0 bits (52), Expect = 7.5
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 55 K*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPT 165
K K++ + I CG K ++I+ DEH P+
Sbjct: 69 KKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPS 105
>At3g15830.1 68416.m02003 phosphatidic acid phosphatase-related /
PAP2-related contains Pfam profile PF01569: PAP2
superfamily
Length = 296
Score = 24.6 bits (51), Expect = 9.9
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 106 NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRASSSTWS 273
N I K ++ + D G + Q+E I ++ GG++ +AS TW+
Sbjct: 17 NPINGKHTNGVTIDGIFDDHNRQIGPINSQMEDIAQKTDDGGGGEWTSKASFMTWT 72
>At2g28220.1 68415.m03426 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 756
Score = 24.6 bits (51), Expect = 9.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 172 YHGDSDLQLERINVYYNEASGGKY 243
+ G +DL L++ N+Y SGG +
Sbjct: 348 FSGGADLVLDKYNMYMESNSGGLF 371
>At2g07360.1 68415.m00843 SH3 domain-containing protein contains
Pfam profile PF00018: SH3 domain
Length = 1196
Score = 24.6 bits (51), Expect = 9.9
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Frame = -1
Query: 207 DALQLQVRVPMVGTG------GVDAVLVGDDLPELSSDLVAALTSLD 85
D LQL + +VG G ++AV + DLP +A LTS+D
Sbjct: 652 DVLQLLWKTCLVGAGPDGKHTALEAVTIVLDLPPPQPGSMAGLTSID 698
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,013,425
Number of Sequences: 28952
Number of extensions: 105729
Number of successful extensions: 322
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,070,560
effective HSP length: 69
effective length of database: 10,072,872
effective search space used: 231676056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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