Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1146
         (250 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_44453| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.1  
SB_59597| Best HMM Match : MobB (HMM E-Value=3.4)                      25   9.4  
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.4  
SB_48206| Best HMM Match : LTXXQ (HMM E-Value=3)                       25   9.4  
SB_37541| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.4  
SB_34803| Best HMM Match : Pox_A32 (HMM E-Value=3.7)                   25   9.4  
SB_57605| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.4  
SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.4  
SB_31261| Best HMM Match : MMR_HSR1 (HMM E-Value=1.5)                  25   9.4  
SB_21289| Best HMM Match : Pox_A32 (HMM E-Value=1.1)                   25   9.4  
SB_15489| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.4  
SB_5103| Best HMM Match : Vicilin_N (HMM E-Value=0.36)                 25   9.4  

>SB_44453| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 156

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +2

Query: 23  SHNNDIYTLFITENSFL 73
           SH++DI TLF+++N FL
Sbjct: 103 SHHHDITTLFLSQNLFL 119


>SB_59597| Best HMM Match : MobB (HMM E-Value=3.4)
          Length = 297

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23  SHNNDIYTLFITENSF 70
           SH++DI T+FI++N F
Sbjct: 107 SHHHDITTIFISQNLF 122


>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 799

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23  SHNNDIYTLFITENSF 70
           SH++DI TLF+++N F
Sbjct: 278 SHHHDITTLFLSQNLF 293


>SB_48206| Best HMM Match : LTXXQ (HMM E-Value=3)
          Length = 513

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23 SHNNDIYTLFITENSF 70
          SH++DI TLF+++N F
Sbjct: 50 SHHHDITTLFLSQNLF 65


>SB_37541| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23  SHNNDIYTLFITENSF 70
           SH++DI TLF+++N F
Sbjct: 107 SHHHDITTLFLSQNLF 122


>SB_34803| Best HMM Match : Pox_A32 (HMM E-Value=3.7)
          Length = 354

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23  SHNNDIYTLFITENSF 70
           SH++DI T+FI++N F
Sbjct: 107 SHHHDITTIFISQNLF 122


>SB_57605| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 359

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23  SHNNDIYTLFITENSF 70
           SH++DI T+FI++N F
Sbjct: 107 SHHHDITTIFISQNLF 122


>SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1761

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23   SHNNDIYTLFITENSF 70
            SH++DI T+FI++N F
Sbjct: 1550 SHHHDITTIFISQNLF 1565


>SB_31261| Best HMM Match : MMR_HSR1 (HMM E-Value=1.5)
          Length = 188

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23  SHNNDIYTLFITENSF 70
           SH++DI TLF+++N F
Sbjct: 107 SHHHDITTLFLSQNLF 122


>SB_21289| Best HMM Match : Pox_A32 (HMM E-Value=1.1)
          Length = 257

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23  SHNNDIYTLFITENSF 70
           SH++DI T+FI++N F
Sbjct: 107 SHHHDITTIFISQNLF 122


>SB_15489| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 127

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23 SHNNDIYTLFITENSF 70
          SH++DI TLF+++N F
Sbjct: 19 SHHHDITTLFLSQNLF 34


>SB_5103| Best HMM Match : Vicilin_N (HMM E-Value=0.36)
          Length = 592

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 23  SHNNDIYTLFITENSF 70
           SH++DI T+FI++N F
Sbjct: 107 SHHHDITTIFISQNLF 122


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,330,075
Number of Sequences: 59808
Number of extensions: 62023
Number of successful extensions: 119
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 16,821,457
effective HSP length: 60
effective length of database: 13,232,977
effective search space used: 291125494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)