Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1138
(299 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.04c |rpl4301|rpl43-1, rpl43, rpl37a-1|60S ribosomal prot... 111 2e-26
SPBC83.02c |rpl4302|rpl43-2, rpl43, rpl37a-2|60S ribosomal prote... 110 5e-26
SPBC16E9.09c |||COPII vesicle coat component Erp5/Erp6|Schizosac... 30 0.063
SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 29 0.15
SPBC4F6.05c |||lectin |Schizosaccharomyces pombe|chr 2|||Manual 27 0.78
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 26 1.4
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 26 1.4
SPAP27G11.04c |||tRNA specific adenosine deaminase subunit Tad3 ... 25 1.8
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 25 3.1
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 3.1
SPBC29A10.14 |rec8||meiotic cohesin complex subunit Rec8|Schizos... 24 4.2
SPAC24B11.06c |sty1|spc1, phh1|MAP kinase Sty1|Schizosaccharomyc... 24 4.2
SPBC29A3.05 |||chromatin remodeling complex subunit|Schizosaccha... 24 5.5
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 24 5.5
SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces ... 23 7.3
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 23 9.6
SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|c... 23 9.6
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch... 23 9.6
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 23 9.6
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 23 9.6
>SPBC800.04c |rpl4301|rpl43-1, rpl43, rpl37a-1|60S ribosomal protein
L37a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 94
Score = 111 bits (268), Expect = 2e-26
Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = +2
Query: 26 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGXWSC--K 199
M KRTKKVG+TGKYG RYGASLR+ V+K+EV QH++Y C FCG++ +KR+ G W C K
Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGK 60
Query: 200 RCKRTVAGGAWVFSTTAAYHA 262
CK+ +AGGAW +T AA A
Sbjct: 61 GCKKVLAGGAWTVTTAAATSA 81
>SPBC83.02c |rpl4302|rpl43-2, rpl43, rpl37a-2|60S ribosomal protein
L37a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 94
Score = 110 bits (264), Expect = 5e-26
Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = +2
Query: 26 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGXWSC--K 199
M KRTKKVG+TGKYG RYGASLR+ V+K+EV QH++Y C FCG+ +KR+ G W C K
Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGK 60
Query: 200 RCKRTVAGGAWVFSTTAAYHA 262
C +T+AGGAW +T AA A
Sbjct: 61 GCSKTLAGGAWTVTTAAATSA 81
>SPBC16E9.09c |||COPII vesicle coat component
Erp5/Erp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 30.3 bits (65), Expect = 0.063
Identities = 17/71 (23%), Positives = 28/71 (39%)
Frame = +2
Query: 62 KYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGXWSCKRCKRTVAGGAWVFS 241
K+ T +R V + H Y +A++ + + + C + + GAW S
Sbjct: 57 KWVTSNNIKIRVQVDETFANNHLIYKNDLRSNEAVRFTTTNEGTHRICYLSTSDGAWFSS 116
Query: 242 TTAAYHADLLS 274
T H DL S
Sbjct: 117 TKTRLHVDLAS 127
>SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 767
Score = 29.1 bits (62), Expect = 0.15
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = +2
Query: 11 ERFTKMAKRTKKVGITGKYGTR-YGASLRKMVKKMEVTQHAKYT----CSFCGKDAMKRS 175
ER + K + KY + +G R++V +++H+ C C K +K
Sbjct: 69 ERIPPSKRIRKAIAYVNKYASGCFGRVERRLVCTRSISRHSNQKLLDFCVECKKHKIK-- 126
Query: 176 CVGXWSCKRC 205
CVG + C RC
Sbjct: 127 CVGNFPCGRC 136
>SPBC4F6.05c |||lectin |Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 26.6 bits (56), Expect = 0.78
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 168 FIASLPQNEQVYFACWVTS 112
F+A + +NE +FA W TS
Sbjct: 84 FVAHVSENENTFFAIWYTS 102
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.8 bits (54), Expect = 1.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 109 LFDHFT*RGTVTCAIFASNSNLFGT 35
+FD FT +T I ASN N FG+
Sbjct: 550 VFDEFTNISNLTSPIEASNGNTFGS 574
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.8 bits (54), Expect = 1.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 74 VCHICQ*FQPFWYVWPF 24
+ ++ Q FQ WY WPF
Sbjct: 1251 IVYLVQDFQRLWYHWPF 1267
>SPAP27G11.04c |||tRNA specific adenosine deaminase subunit Tad3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 25.4 bits (53), Expect = 1.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 157 GCYETFLCRXLVL*AMQEDCSRRSLGILH 243
G + +LC+ L + E C S+G+LH
Sbjct: 234 GSKDRYLCKDLTVVMTHEPCVMCSMGLLH 262
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 24.6 bits (51), Expect = 3.1
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 122 QHAKYT-CSFCGKDAMKRSCVGXWSCKRCKR 211
+H K T C C + +K C W C+ CK+
Sbjct: 15 RHRKITSCRECHR--LKLKCDRVWPCENCKK 43
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 24.6 bits (51), Expect = 3.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 111 IFLTILRREAP*RVPYLPVIPTFLVRLAILVNL 13
I L I + P Y+P++P L RL L N+
Sbjct: 253 IMLEICSSQLPFVEQYMPILPLLLERLKSLQNM 285
>SPBC29A10.14 |rec8||meiotic cohesin complex subunit
Rec8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 561
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 6 YRRGLPKWPNVPKRLELL 59
YR+ LP P++P R+E L
Sbjct: 427 YRKRLPHSPSMPSRVEFL 444
>SPAC24B11.06c |sty1|spc1, phh1|MAP kinase Sty1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 349
Score = 24.2 bits (50), Expect = 4.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3
Query: 171 RFIASLPQNEQVYFA 127
RF+ SLPQ E+V FA
Sbjct: 248 RFVQSLPQKEKVPFA 262
>SPBC29A3.05 |||chromatin remodeling complex
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 139
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = +2
Query: 131 KYTCSFCGKDAMKRSCVGXWSCKRCKRTVA 220
KY C CG + C S RC + A
Sbjct: 110 KYACQNCGTSYCSKGCEVIHSETRCMKVYA 139
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 13 EVYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNPTRKVYLL 144
EV ++GQ Y + W + T ++T + +P R VYL+
Sbjct: 178 EVIRDGQEYNVMADIWSLGITAYEIATGSPPHAKEDPFRAVYLI 221
>SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 607
Score = 23.4 bits (48), Expect = 7.3
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3
Query: 174 ERFIASLPQNEQVYFA 127
ERF ++PQ++QV FA
Sbjct: 273 ERFAVAVPQSKQVSFA 288
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 25 NGQTYQKGWNYWQIW 69
NG T Q G+ WQ W
Sbjct: 656 NGNTSQSGFMAWQRW 670
>SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 559
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3
Query: 135 YFACWVTSIFLTILRREAP*RVPYLPVIPTFLVRLAILVNL 13
YF WV S ++R E R + I T++ A+L+ L
Sbjct: 202 YFVYWVISFPFHLIRPEYLQRFFLIKSISTYIACFAMLIFL 242
>SPBC13E7.02 |cwf24||GCN5-related N
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +2
Query: 80 GASLRKMVKKMEVTQHAKYTCSFCGKDAMK--RSCVGXWSCKRCKRT 214
GA L + + K E + + C C KD + G C++C T
Sbjct: 234 GAKLEEGMVKNEKKEDIPFVCLICKKDYRSPIATTCGHHFCEQCAIT 280
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 64 FASNSNLFGTFGHFGKPL 11
FA+N LFG HF + L
Sbjct: 149 FATNEKLFGVKSHFDEDL 166
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 23.0 bits (47), Expect = 9.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 183 PTQERFIASLPQNEQVYFACWVTSIFLTI 97
P Q +F+ +NE +Y A TSIF ++
Sbjct: 253 PCQLKFLKLKFENEILYTAMHTTSIFKSV 281
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,305,626
Number of Sequences: 5004
Number of extensions: 25149
Number of successful extensions: 75
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 73700136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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